Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0266 ATGGGAGAAGAAGGTATTTGGAAAGGTGTTACAAAGAAAGGGGTCAACCCTGGGAAGGCTACCATATTAGCTCTTGGCAAGGCTTTCCCTCCACAGCTTGTCATGCAAGAGTATTTAGTTGATGGATATTTCAGGAGCACAAACTGTGACAATCCTGAGCTTAAGCAGAAGCTCACTAGACTTTGCAAAACAACCACAGTGAAAACAAGGTACGTGGTTATGTCAGAGGAAATACTGATAAAGTATCCAGAGCTTGTGACTGAAGGCACCCCCACAGTGAAGCAGAGACTAGAGATATGTAACGAGGCAGTGACAGAAATGGCCATTGAGGCTGCACTAGGTTGCATTAAGAACTGGGGTGGAGCATTATCAGACATAACACACTTTATGTCGAAAGGACTAGGACTGAGCCCTGATACTCAACGAATCATGCTCTATTTCGCTGGTTGTTCAGGAGGTGTGGCTGGCCTACGTGTTGCAAAAGACATAGCTGAGAACAACCCTGGAAGTCGGGTGTTGCTTGCTACCTCAGAAACTACAATCATTGGGTTCAAGCCACCAAGTGCAGATAGACCCTATGATCTTGTTGGAGTGGCACTCTTTGGGGATGGTGCTGGTGCCATGATAATTGGCTCAGACCCAATATTGGAGCATGAGAAGCCTCTCTTTGAGCTTCACACTGCAGTTCAGGAGTTTTTGCCACACACTGAGAAGAAAATTGATGGGAGGCTGACAGAAGAGGGGATAAGCTTCAAGCTAGCAAGGGAACTTCCTCAGATAATTGAAGACAATGTTGAAGGATTCTGTGACAAATTAATGAGTGTTGTTGAGTTCCAGAATAAGGAGTACAACAAGCTCTTTTGGGCTGTACATCCAGGGGGACCTGCCATCTTGAATCGCATTGAGAAGAGACTTGATTTGTTACCCGAGAAACTAAGTGCAAGTAGAAGGGCTCTCATGGATTATGGCAATGCTAGCAGTAACACCATTGTGTATGTGCTGGAGTATATGATAGAGGAGGGTCTCAAGACTAGAAAAGATGGTAGAGAAGATCCTGAATGGGGCTTGATACTTGCATTTGGACCCGGAATTACATTTGAGGGAATTCTTGCCAGGAACTTGTGTGCTTGA 1131 0.4518 MGEEGIWKGVTKKGVNPGKATILALGKAFPPQLVMQEYLVDGYFRSTNCDNPELKQKLTRLCKTTTVKTRYVVMSEEILIKYPELVTEGTPTVKQRLEICNEAVTEMAIEAALGCIKNWGGALSDITHFMSKGLGLSPDTQRIMLYFAGCSGGVAGLRVAKDIAENNPGSRVLLATSETTIIGFKPPSADRPYDLVGVALFGDGAGAMIIGSDPILEHEKPLFELHTAVQEFLPHTEKKIDGRLTEEGISFKLARELPQIIEDNVEGFCDKLMSVVEFQNKEYNKLFWAVHPGGPAILNRIEKRLDLLPEKLSASRRALMDYGNASSNTIVYVLEYMIEEGLKTRKDGREDPEWGLILAFGPGITFEGILARNLCA* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0266 376 Gene3D - 6 221 IPR016039 GO:0016746
Pvu11g0266 376 SUPERFAMILY Thiolase-like 221 372 IPR016039 GO:0016746
Pvu11g0266 376 SUPERFAMILY Thiolase-like 17 214 IPR016039 GO:0016746
Pvu11g0266 376 PANTHER TYPE III POLYKETIDE SYNTHASE B 13 374 - -
Pvu11g0266 376 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 13 374 IPR011141 GO:0009058|GO:0016747
Pvu11g0266 376 Gene3D - 222 375 IPR016039 GO:0016746
Pvu11g0266 376 CDD CHS_like 20 370 - -
Pvu11g0266 376 PIRSF PKS_III 8 375 IPR011141 GO:0009058|GO:0016747
Pvu11g0266 376 Pfam Chalcone and stilbene synthases, C-terminal domain 224 374 IPR012328 -
Pvu11g0266 376 Pfam Chalcone and stilbene synthases, N-terminal domain 11 214 IPR001099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0266 Pvu-Chr11 2140672 2142301 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0266 126 341 Acyl Lipid Metabolism Gene Families AT1G71160 24.291 8.50e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0266 - - pvu:PHAVU_011G026000g 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0266 11 2140672 2142301 Pvu11g0266 11 2140672 2142301 ECH