Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0262 ATGGAGACAGGTTGTGGGAGGCTGAGCAGGAAGAAAAGTGGTGGAAACGGACAGGTTCTAGACGGTTCCAATATTATGGAGTTGGTTGGAAACGACCAAGTTTTCACCACCTTCGTCGACAATAAGTTCCACGAGTTAGACACAGACAGAGATGGCAAACTCTCTGTGAAAGAGCTCCAACCTGCTGTTGCTGACATAGGTGCTGCTCTCGGCCTCCCTGCTCACGGCACCAATCCTGAATCCGATCACATCTATTCCGAGGTGTTGAATGAATTCACACATGGGAAGCAGCAAAAAGTGAGCAAAACTGAGTTCAAAGAGGTTCTCTCTGATATTCTCTTGGGTATGGCTGCTGGACTGAAGCGTGACCCAATTGTGATACTTCGCATTGATGGGGAAGATCTTCTGGAATTTGTTAATGGTTCAGGTTATGAAGCAGAAATGGCATCCATATTCTCTCAGATTGAATCCCCTACCAGATCACTGCATGCCCATATAATTGAAGCTCTTGGCAAGCTCACTGTGGAACAAGGAATTCCTCCTACATCAGATGCTTGGGTTTTAAGCAACATTGTGGAACCTGCACTGCTATATCAAGACAGGTCTGGTTTGGATAAGCCTGTTTCTCAGGAAACATTTTTGGAGGAATTTAAGGTAGTGGCATTGGGTGTGGCTAATCGTCTTAAGGAACAACCAGTGATAGTTGCTCACAGTGAGAACATCTTTGATGGAAGTGGTGTCAAGAGACTATTATCCAACAAGTTTGAATTGGACAAGACTTTGAACTCAGCTTTAGAGACTTTGCCTAAAGATCGCAATGGAAAGATGTCAAAAGAGTATCTACGGGTGGCACTGGACACGGTGGCTCCATCTGCTGGTTTACCTCCCCTTGGTGCAATTGAAGAGATGGATAAGGTTATTGGTGAAGTGTTTAAGATGGTGAATGCAGATGAAGCAAAGCTGGTGAAAGAAGAGGAGTTCAAGAAAGTTTTAACTGAAATACTGGGGAGCATAATGTTGCAGTTAGAGGGAAGTCCCATATCAGTTTCTTCAAATTCTGTAGTGCACGAGCCTCTAGACTCATCTTCTACACTTCTTCAGCCATCCTCTAGTGAAACTGCACCCTAG 1128 0.4459 METGCGRLSRKKSGGNGQVLDGSNIMELVGNDQVFTTFVDNKFHELDTDRDGKLSVKELQPAVADIGAALGLPAHGTNPESDHIYSEVLNEFTHGKQQKVSKTEFKEVLSDILLGMAAGLKRDPIVILRIDGEDLLEFVNGSGYEAEMASIFSQIESPTRSLHAHIIEALGKLTVEQGIPPTSDAWVLSNIVEPALLYQDRSGLDKPVSQETFLEEFKVVALGVANRLKEQPVIVAHSENIFDGSGVKRLLSNKFELDKTLNSALETLPKDRNGKMSKEYLRVALDTVAPSAGLPPLGAIEEMDKVIGEVFKMVNADEAKLVKEEEFKKVLTEILGSIMLQLEGSPISVSSNSVVHEPLDSSSTLLQPSSSETAP* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0262 375 PANTHER CALCIUM-BINDING EF-HAND PROTEIN 1 373 - -
Pvu11g0262 375 MobiDBLite consensus disorder prediction 350 375 - -
Pvu11g0262 375 SMART efh_1 38 66 IPR002048 GO:0005509
Pvu11g0262 375 SMART efh_1 306 334 IPR002048 GO:0005509
Pvu11g0262 375 SMART efh_1 260 288 IPR002048 GO:0005509
Pvu11g0262 375 Gene3D - 39 335 - -
Pvu11g0262 375 ProSitePatterns EF-hand calcium-binding domain. 47 59 IPR018247 -
Pvu11g0262 375 SUPERFAMILY EF-hand 42 343 IPR011992 -
Pvu11g0262 375 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 373 - -
Pvu11g0262 375 ProSiteProfiles EF-hand calcium-binding domain profile. 34 69 IPR002048 GO:0005509
Pvu11g0262 375 Pfam EF-hand domain pair 42 108 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0262 Pvu-Chr11 2128424 2132260 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0262 18 373 EF-hand Containing Proteins AT4G38810 68.802 1.90e-174 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0262 - - gmx:100820516 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0262 11 2128424 2132260 Pvu11g0262 11 2128424 2132260 ECH