Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0256 ATGATTTCCTCAAAAAAGATCATCCAAATGGCTTGGAAGTGGCAGAAGGAGGCCACAAATTACCAAAGGAAGAGAATTCTGTGGCCAAAGACTCAAGAAAATGCAGCAAAAGCAGAAGGTTGCAGCGTGTGGACAAAAGCTGAAAAGGGTCACTTTGTTGTGTACAGCATGGATCAGAAACGCTTTGTGCTTCCCTTACAGTACTTGAAAAACAACATTTTCAGAGAGCTTTTCAAGATGGCAGAAGAAGAGTTTGGTCTTTCGAGCAACGTGCCCTTAACGCTGCCTTGTGAAGGGACGTTAATAGAGTACGTGATAACGTTGATCGAGAGAAACGTAACTAAGGATCTTGAAGAAGCTGTGTTGATGTTCATACCTACCAGTCGATGCCATTCTTCATTTGATCATCATCGTGAACCAACCAATCAACAACATTTGCTTTGCAGCTACTGA 453 0.4238 MISSKKIIQMAWKWQKEATNYQRKRILWPKTQENAAKAEGCSVWTKAEKGHFVVYSMDQKRFVLPLQYLKNNIFRELFKMAEEEFGLSSNVPLTLPCEGTLIEYVITLIERNVTKDLEEAVLMFIPTSRCHSSFDHHREPTNQQHLLCSY* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0256 150 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 150 IPR003676 GO:0009733
Pvu11g0256 150 PANTHER AUXIN-RESPONSIVE PROTEIN FAMILY, PUTATIVE-RELATED 1 150 - -
Pvu11g0256 150 Pfam Auxin responsive protein 6 109 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0256 Pvu-Chr11 2089888 2090340 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0256 49 117 Calmodulin-binding Proteins AT5G20810 40.000 4.66e-11 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0256 - - gmx:100803097 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0256 11 2089888 2090340 Pvu11g0256 11 2089888 2090340 ECH