Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0248 ATGAACACGCTCCTCCGATCCACTCTGAGGACTAAGAATGCTTCATCTCTAGCATATGCTGCGGTTTCCAGAAGTGTTCAGGAAAATCTTCTTCAGAGTCGCTTGTGGTCTAGATCAAATAGCACGGAAGCTTCCTTGGCAAAGGATGATTCAGCTAATGAAGGGAAAAATGGTCCAGGGTTCAAAGGCCATAGTATGCTTGCTCCTTTCACGGCTGGGTGGCAGACTACTGATTTGCATCCTCTTGTTATAGAAAAGTCAGAGGGAAGCTATGTGTATGATACGAATGGGAAGAAATATCTTGACGCACTTGCTGGTTTATGGGCCACTGCTTTAGGGGGAAGTGAGTCACGTCTTGTTGATGCTGCCATGGCACAATTCAAGAAGTTGCCCTTTTACCATTCCTTTTGGAATCGAACCACCCTACCTTCTCTGGAGCTAGCCAAGGAACTCCTAGAAATGTTCACAGCCAGAAAAATGGCAAAAGCTTTTTTTGTTAACAGTGGATCAGAAGCCAATGACACTCAGGTGAAACTTGTATGGTATTATAACAATGCGCTTGGAAGACCAGATAAGAAGAAGTTCATAGCTCGTGCTAAATCGTATCACGGTTCAACATTGATAGCAGCCAGTCTTTCCGGACTTCCGGCTCTGCATCAGAAATTTGATTTGCCAGCACCTTTTGTATTGCATACTGATTGTCCACACTACTGGCGGCATCATCTTCCAGGTGAGACTGAGGAAGAATTTTCAACCAGATTGGCCAACAATTTAGAGCAGCTGATTCTGAAAGAGGGACCAGATACAATTGCTGCATTTATTGCTGAACCTGTAATGGGGGCAGGAGGAGTAATACCTCCACCGTCAACTTATTTTGAGAAGGTCCAAGCTGTTGTCAAGAAGTATGACATTCTTTTCATTGCCGATGAGGTAATATGTGCCTTTGGAAGGGTTGGGACAATGTTTGGATGTGACAAGTACAACATTAAGCCGGACCTTGTATCCCTGGCTAAGGCATTGTCTTCTTCGTATTTGCCAATTGGAGCTGTGCTTGTAAGTCCAGAAATTGCAGAAGTTATACACACACAAAGTAACAAACTTGGTGCATTTTCTCATGGGTTTACTTATTCTGGACACCCTGTAAGCTGTGCTGTTGCAATTGAAGCACTCAAGATCTATAAGGAAAGAAATATTGTTGACCAGGTGAACAAGATTTCCCCAAGGTTCCAAGAGGGCTTAAAAGCTTATTCTGACAGTCCCATCATTGGAGAGATACGGGGAACTGGCTTGATTCTGGGCACTGAGTTCACAGACAACAAATCACCTAATGATCCGTTTCCTCCTGAATGGGGAGTAGGTGCCTATTTTGGAGCACGATGTCAGAAGTTTGGGATGTTAGTTCGTGTAGCGGGAGATAACATCATGATGTCTCCACCATATATTATTTCTCCTGAAGAAGTTGACACGTTAATCCGTATTTATGGGGAAGCTTTGAAAGAAACGGAAAAGAGGGTACAAGAACTCAAGTCTCAGCGCAAGTAG 1542 0.4377 MNTLLRSTLRTKNASSLAYAAVSRSVQENLLQSRLWSRSNSTEASLAKDDSANEGKNGPGFKGHSMLAPFTAGWQTTDLHPLVIEKSEGSYVYDTNGKKYLDALAGLWATALGGSESRLVDAAMAQFKKLPFYHSFWNRTTLPSLELAKELLEMFTARKMAKAFFVNSGSEANDTQVKLVWYYNNALGRPDKKKFIARAKSYHGSTLIAASLSGLPALHQKFDLPAPFVLHTDCPHYWRHHLPGETEEEFSTRLANNLEQLILKEGPDTIAAFIAEPVMGAGGVIPPPSTYFEKVQAVVKKYDILFIADEVICAFGRVGTMFGCDKYNIKPDLVSLAKALSSSYLPIGAVLVSPEIAEVIHTQSNKLGAFSHGFTYSGHPVSCAVAIEALKIYKERNIVDQVNKISPRFQEGLKAYSDSPIIGEIRGTGLILGTEFTDNKSPNDPFPPEWGVGAYFGARCQKFGMLVRVAGDNIMMSPPYIISPEEVDTLIRIYGEALKETEKRVQELKSQRK* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0248 513 CDD OAT_like 76 498 IPR005814 GO:0008483|GO:0030170
Pvu11g0248 513 Coils Coil 491 513 - -
Pvu11g0248 513 Pfam Aminotransferase class-III 81 494 IPR005814 GO:0008483|GO:0030170
Pvu11g0248 513 Gene3D Aspartate Aminotransferase, domain 1 82 498 IPR015422 GO:0003824
Pvu11g0248 513 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 306 343 IPR005814 GO:0008483|GO:0030170
Pvu11g0248 513 Gene3D - 116 398 IPR015421 GO:0003824
Pvu11g0248 513 PANTHER GAMMA AMINOBUTYRATE TRANSAMINASE 1, MITOCHONDRIAL 18 508 - -
Pvu11g0248 513 SUPERFAMILY PLP-dependent transferases 70 500 IPR015424 -
Pvu11g0248 513 PANTHER ADENOSYLMETHIONINE-8-AMINO-7-OXONONANOATE AMINOTRANSFERASE 18 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0248 Pvu-Chr11 2006615 2014432 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0248 K16871 - gmx:100815181 942.184