Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0239 GATAATCTAACTGTAGCTGTTGATGATGATGGCTGCTTTACTGAAAAAATTACCGACTTTAGTGGGTGCTACATCAAACAAGCTGACAAAGATATCATTGAAGCTGTTAAGGCAAAGGGTAGATTGCTTAAGTCTGGAGCTTTTACGCATTCTTATCCATACTGCTGGAGATCTGATACCCCTCTCATTTACAGAGCTGTTCCGAGCTGGTTTGTTAGAGTGGAGTTGTTGAAAGAGCAATTGCTGGAAAACAATAAACAGACCTACTGGGTCCCTGATTTTGTCAAGGACAAGCGATTTCACAATTGGCTGGAAAATGCAAGAGATTGGGCAATTAGTCGTAGTAGATTTTGGGGAACCCCTCTCCCTCTATGGATTAGTGAGGATGAGAAGGAAATAGTTGTCATAGATTCTGTTGAAAAGCTTGAAAAGCTTTCTGGTGTAAAGGTGTTTGATCTTCATCGTCACAACATAGATCATATTACAATTAAATCTGACAGTGGTCGTGTACTTCGCCGTGTTGATGATGTGTTTGACTGCTGGTTTGAGAGTGGATCCATGCCGTATGCGTATATTCATTATCCTTTTGAAAATGTTGAGCTGTTTGAGAAGAATTTTCCTGGCCATTTTGTGGCTGAAGGGCTGGATCAAACACGTGGTTGGTTTTATACCCTTATGGTGCTGGCTACTGCTTTATTTGGCAAGCCTGCATTTAGGAATCTGATATGCAATGGACTTGTCCTAGCTGAAGACGGGAAAAAGATGAGTAAAAGCTTGAAAAATTATCCTTCACCAATGGATGTTATTAATGATTATGGAGCAGATGCATTGCGATTGTACCTTATCAACTCTCCTGTTGTGCGTGCTGAGCCACTTCGCTTCAAGAAGGAAGGAGTTTATGGTGTTGTCAGGGATGTTTTCCTTCCTTGGTATAATGCATACAGATTCCTTGTTCAAAATACAAAGAGGCTGGAAGTTGAAGGTCTAGCACCTTTTGTCCCCTTTGATCAGGCCTCACTTTTGAAGTCATCAAATGTTCTTGATCAATGGATTAACTCAGCCACCCAAAGTCTTATTCATTTTGTCCGACAGGAAATGGATGGGTACCGCCTTTACACGGTGGTTCCTTATCTTCTGAAGTTTCTTGATAACCTTACCAATATTTATGTAAGGTTCAACCGTAAGAGACTTAAAGGTCGTTCAGGGGAAGAAGATTGTAGGATAGCACTATCAACTCTTTATAATGTCCTTTTGTTGTCTTGTAAAGTGATGGCGCCTTTTACACCTTTCTTCACTGAGGTCCTCTATCAAAATATGCGGAAAGTTTGTGAGGGATCAGACGAAAGCATACACTATTGCAGTTTTCCCACAGAAGAAGGAAAGAGGGGAGAACGAATTGAGCAGAGTGTTTCAAGGATGATGACAATAATTGATCTGGCTAGAAATATTCGTGAACGGCACAACAAGCCTCTTAAGACTCCACTAAGGGAGATGGTTATAGTTCATCCCGATGCCGACTTCCTTGATGACATAAATGGAAAATTGAAGGAGTATGTGCTGGAGGAACTCAATGTACGATCCCTTGTTCCATGTAATGATACCTTAAAATATGCATCTTTACGTGCCGAACCTGAATTTAGTGTTTTAGGTAAAAGACTAGGAAAATTGATGGGCACTGTTGCTAAAGAAGTCAAAGCAATGTCACAGGAAAATATTTTGGCTTTTGAGAATGCTGGAGAAGTTATCATTGCAAATCACTGTTTGAAGCTGACTGATATTAAGGTTCTCCGTGATTTTAAACGACCTGATGGTATGACTGAGAATGAGGTTGATGCTGCTGGAGATGGTGATGTTCTAGTGATATTAGACTTGCGCCCTGATGATTCATTGTATGAGGCTGGTGCTGCTCGAGAGATTGTTAATAGGATTCAAAAGTTGCGGAAGAAAGTTGCTCTTGAACCAACTGACATGGTGGAGGTTTACTTTGAATCATTAGACGATGACAAATCAGTTTCTCAGAGAGTTTTGCATTCACAGGAATCCTACATCAGGGATGCTATTGGTACACAGTTGCTTCCAAATTCTCTGATGCCTGTACATGCAGTTGTCCTCGGCGAAGAGAGGTTCCATGGGATAGCTAGCATGTCATTTGGTATCACATTGACGAGACCTGCATTGATGTTTAACAAAAAAGCCATTCTTTCACTGTTTACAGGTGATGCAAAAAGTGCACATAATTTGCAAACTTACCTGCTATCAAGAGATCATTCGAAGTTGAAGTCTGAGTTTCAAGATGGAAATAGAAAGAAAATTATTGATTCAATTGATCAGCTACCTGCTGTGGAAGTGGTTCTTGGTGAGCATGTTTTTCTCACTGTAGGGGACTATAACCTTGCTGGAAAATCTTGA 2409 0.406 DNLTVAVDDDGCFTEKITDFSGCYIKQADKDIIEAVKAKGRLLKSGAFTHSYPYCWRSDTPLIYRAVPSWFVRVELLKEQLLENNKQTYWVPDFVKDKRFHNWLENARDWAISRSRFWGTPLPLWISEDEKEIVVIDSVEKLEKLSGVKVFDLHRHNIDHITIKSDSGRVLRRVDDVFDCWFESGSMPYAYIHYPFENVELFEKNFPGHFVAEGLDQTRGWFYTLMVLATALFGKPAFRNLICNGLVLAEDGKKMSKSLKNYPSPMDVINDYGADALRLYLINSPVVRAEPLRFKKEGVYGVVRDVFLPWYNAYRFLVQNTKRLEVEGLAPFVPFDQASLLKSSNVLDQWINSATQSLIHFVRQEMDGYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRSGEEDCRIALSTLYNVLLLSCKVMAPFTPFFTEVLYQNMRKVCEGSDESIHYCSFPTEEGKRGERIEQSVSRMMTIIDLARNIRERHNKPLKTPLREMVIVHPDADFLDDINGKLKEYVLEELNVRSLVPCNDTLKYASLRAEPEFSVLGKRLGKLMGTVAKEVKAMSQENILAFENAGEVIIANHCLKLTDIKVLRDFKRPDGMTENEVDAAGDGDVLVILDLRPDDSLYEAGAAREIVNRIQKLRKKVALEPTDMVEVYFESLDDDKSVSQRVLHSQESYIRDAIGTQLLPNSLMPVHAVVLGEERFHGIASMSFGITLTRPALMFNKKAILSLFTGDAKSAHNLQTYLLSRDHSKLKSEFQDGNRKKIIDSIDQLPAVEVVLGEHVFLTVGDYNLAGKS* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0239 802 SUPERFAMILY Nucleotidylyl transferase 50 304 - -
Pvu11g0239 802 Pfam Domain of unknown function (DUF5915) 517 684 - -
Pvu11g0239 802 Gene3D - 296 488 - -
Pvu11g0239 802 Gene3D HUPs 23 291 IPR014729 -
Pvu11g0239 802 CDD IleRS_core 19 294 - -
Pvu11g0239 802 PRINTS Isoleucyl-tRNA synthetase signature 50 65 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Pvu11g0239 802 PRINTS Isoleucyl-tRNA synthetase signature 173 186 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Pvu11g0239 802 PRINTS Isoleucyl-tRNA synthetase signature 213 222 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Pvu11g0239 802 Pfam Anticodon-binding domain of tRNA ligase 348 497 IPR013155 GO:0004812|GO:0006418
Pvu11g0239 802 PANTHER BNAUNNG00270D PROTEIN 2 732 - -
Pvu11g0239 802 PANTHER SOLEUCYL-TRNA SYNTHETASE 2 732 IPR023586 GO:0004822
Pvu11g0239 802 Pfam tRNA synthetases class I (I, L, M and V) 4 290 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pvu11g0239 802 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 309 558 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pvu11g0239 802 SUPERFAMILY ValRS/IleRS/LeuRS editing domain 5 52 IPR009008 GO:0002161|GO:0006418
Pvu11g0239 802 CDD Anticodon_Ia_Ile_ABEc 294 481 IPR033709 GO:0000049
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0239 Pvu-Chr11 1849473 1863837 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0239 K01870 - gmx:100791830 1531.15