Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0238 ATGTTTTTGACGAGACCCATTTTCCGGGGACCCTCCCTTTGGGCGTTGCACACTTCCCACGCTTATTCCTCTGCCTCAGCGGCTGCAATTCAAGCTGAGAGAACCATCAAAGAAGGCCCCAGAAACGATTGGAGCCGAGACGAAGTTAAATCCATCTACGACTCTCCCGTTCTCGATCTTCTCTTCCATGGGGCTCAAGTTCACAGACATGCCCATAACTTCAGGGAAGTGCAGCAATGTACTCTTCTGTCTATCAAAACAGGAGGTTGCAGTGAAGATTGTTCTTACTGTCCACAGTCATCTAGGTATGATACCGGAATCAAAGGCCAACGCCTTATGAACAAGGAAGCTGTTCTCCAGTCTGCAAAGCGGGCAAAAGAGGCTGGGAGCACTCGTTTTTGTATGGGTGCTGCGTGGAGGGACACACTAGGAAGAAAGACTAACTTCAACCAGATCCTTGAATATGTGAAAGACATAAGGGAAATGGGGATGGAGGTTTGCTGCACCCTTGGCATGCTGGAGAAACAGCAGGCTATTGAACTCAAGAAGGCTGGTCTCACGGCGTATAATCACAATCTTGACACTTCAAGGGAATATTATCCAAACATCATCACAACAAGGACTTATGATGAGCGCTTGGAAACACTTGAGTTTGTTCGTGATGCAGGGATCAATGTTTGTTCTGGAGGAATTATAGGGCTTGGAGAAGCAGAGGAGGACCGTGTAGGTTTGTTACATACATTGTCAACACTTCCCACCCATCCAGAGAGTGTTCCTATTAATGCACTTATTGCTGTGAAGGGAACCCCTCTAGAGAATCAGAAGCCTGTTGAAATATGGGAGATGATTCGCATGATAGGCACAGCACGTATAATAATGCCAAAAGCAATGGTCAGGTTATCTGCTGGCAGAGTCCGGTTCTCCATGCCTGAGCAGGCATTGTGTTTTCTTGCTGGTGCAAATTCCATATTCACTGGTGAAAAGCTTCTCACTACACCCAACAATGACTTTGATGCTGATCAACTCATGTTCAAAGTCCTTGGACTTCTCCCAAAAGCTCCAAGCTTTCATGAAGGTGAAACTAATGAGACAGAGGATTACAAGGAAGCAGCTTCATCTAGTTGA 1125 0.4622 MFLTRPIFRGPSLWALHTSHAYSSASAAAIQAERTIKEGPRNDWSRDEVKSIYDSPVLDLLFHGAQVHRHAHNFREVQQCTLLSIKTGGCSEDCSYCPQSSRYDTGIKGQRLMNKEAVLQSAKRAKEAGSTRFCMGAAWRDTLGRKTNFNQILEYVKDIREMGMEVCCTLGMLEKQQAIELKKAGLTAYNHNLDTSREYYPNIITTRTYDERLETLEFVRDAGINVCSGGIIGLGEAEEDRVGLLHTLSTLPTHPESVPINALIAVKGTPLENQKPVEIWEMIRMIGTARIIMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKVLGLLPKAPSFHEGETNETEDYKEAASSS* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0238 374 SUPERFAMILY Radical SAM enzymes 42 351 - -
Pvu11g0238 374 SMART BATS_2 259 351 IPR010722 -
Pvu11g0238 374 Gene3D Aldolase class I 41 353 IPR013785 -
Pvu11g0238 374 PIRSF Biotin_synth 24 358 IPR024177 -
Pvu11g0238 374 MobiDBLite consensus disorder prediction 355 374 - -
Pvu11g0238 374 Pfam Biotin and Thiamin Synthesis associated domain 259 349 IPR010722 -
Pvu11g0238 374 SMART MiaB 80 288 IPR006638 GO:0003824|GO:0051536
Pvu11g0238 374 CDD Radical_SAM 87 286 - -
Pvu11g0238 374 Pfam Radical SAM superfamily 87 245 IPR007197 GO:0003824|GO:0051536
Pvu11g0238 374 PANTHER BIOTIN SYNTHASE 19 369 IPR002684 GO:0004076|GO:0009102
Pvu11g0238 374 Hamap Biotin synthase [bioB]. 42 352 IPR002684 GO:0004076|GO:0009102
Pvu11g0238 374 TIGRFAM bioB: biotin synthase 51 349 IPR002684 GO:0004076|GO:0009102
Pvu11g0238 374 SFLD Radical SAM 37 355 IPR007197 GO:0003824|GO:0051536
Pvu11g0238 374 SFLD biotin synthase 37 355 IPR024177 -
Pvu11g0238 374 ProSiteProfiles Radical SAM core domain profile. 75 304 IPR007197 GO:0003824|GO:0051536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0238 K01012 - gmx:732577 704.516