Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0235 ATGGAGATAGAAGCAGCAACTGCCATCGAAAATGGTGTTGCTGAGTGTGGTGAAACGATGGGAGTTTCAGAGAAGAGAGGGATGTATCTTGTGTGGGAAGATTTAAGTGTTGTGCTTCCAAATTTTGGAAATGGACACACTAAGAGATTGCTTAATGGGTTGAGTGGATATGCTGAACCAAACAAAATCATGGCCATCATGGGTCCTTCTGGCTCTGGAAAATCTACTCTTCTTGATGCTTTAGCAGGAAGACTCTCCAGAAACCTGATCATGTCTGGAAATGTGTTTCTCAATGGAAAGAAGAGGAGATTGGATTATGGAGGTGTTGCTTATGTGACGCAAGAAGACACAATGCTGGGAACTCTGACAGTGAGAGAGACAATATATTACTCAGCGAATCTGAGGCTACCAGGAAGCATGAGGAAAGAAGAGGTGAATGAGAGAATAGAGGGAACAATTATGGAAATGGGTCTTCAAGAATGTGCAGATCGGTTAATAGGGAATTGGCATTTGAGAGGTATAAGCGGTGGAGAAAAGAGAAGGCTAAGCATTGCTCTTCAAATCCTCACAAGGCCTACCCTCTTGTTCCTTGATGAACCCACCACTGGTCTTGATAGTGCCTCAGCATATTTTGTTGCTCAAACTCTCAGAAATCTCGCTCATGATGCCAAGACTGTTATCTCTTCTATACACCAACCCAGTAGTGAGGTTTTTGCCCTCTTTGATCATCTTTTTCTTCTTTCTGGGGGTCAAACAGTGTACTTTGGACCTGCACAAAAAGCAACTCAGTTCTTTGCCAAAGCGGGATTCCCGTGTCCAAGTAGAAGAAACCCTTCTGATCATTTTCTCCATTGTATCAATTCAGACTTTGACGCTGTCACAGCAGCAATCACTGCCTCCCAAACAACACAAGAAGGAATATCATTATCAACTGCTGAAACCAAAGCAATACTTGTAGAAAAATACCGATGGTCGGAGCAGGCAAACACTGCAAGAGCAAGAATCAAGGAAATCTCAAACATTGAAGGGCATGATTTTGAAAGGAAAAGGAAAAGTGGAGCAAAATGGTGGAAGCAACTGTCAATGCTGACTCAGAGATCTTTCTTGAACATGTCGAGAGATGTGGGATACTACTGGATCAGGATAACCATCTACATTGCCTTATCTTTGTGTGTTGGAACAATCTTCTATGAAGTTGGATCCAGTTATACAGCCATTTTTGCAAGAGGAGCATGTGGCGCTTTTATCTCAGGCTTCATGACATTCATGTCCATTGGTGGCTTCCCTTCTTTTATAGAAGAAATGAAGGTGTTCAATAAAGAAAGACTGAATGGGTATTATGGCGTTGGAGTCTACATTCTCTCAAATTTTATCTCTTCCCTTCCCTTTGTGACAGTGATGTCCATTGCCACAGGGACAATAACTTATTATATGGTTAAGTTTCGTTCAGAATTTTCACATTTTGTGTATATCTGTCTGGATCTCATTGGGTGCATTGCGGTTGTGGAGAGCTCCATGATGATTATAGCTTCACTTGTTCCCAACTTCCTAATGGGATTGATCATTGGAGCAGGATATATTGGTGTTATGATGATGACTGCTGGCTATTTCCGTCGGATCCCTGATCTTCCCAAATTCTTCTGGCGTTACCCAATATCTTACATCAATTATGGTGCTTGGGGATTGCAGGGAGCTTACAAGAATGACATGATTGGGATGGAGTTCGAACCCTTATTACCTGGTGCTCCCAAGCTGAAAGGAGAATTCATCCTGAAAAGTGTGCTTGGAATTAAAATTGATTATTCAAAGTGGTGGGACTTAGGTGCAGTAGTGATGATCCTGATATTTCTTAGGGTTCTTTTCTTCTTTATTCTGAAATTTAAGGAGAGAGTTGGACCTTTGTTTTATAGCATCTATGCCAGACAAACTCTTCACCGTATAAAGAAGAGACCTTCCTTCAGAAAAGGACCATCTTTCCCTTCCAAAAGACACCAATCACTTCATCCATTGTCTTCTCAAGAGGGTCTCAACTCCCCTCTTCATTAG 2046 0.4179 MEIEAATAIENGVAECGETMGVSEKRGMYLVWEDLSVVLPNFGNGHTKRLLNGLSGYAEPNKIMAIMGPSGSGKSTLLDALAGRLSRNLIMSGNVFLNGKKRRLDYGGVAYVTQEDTMLGTLTVRETIYYSANLRLPGSMRKEEVNERIEGTIMEMGLQECADRLIGNWHLRGISGGEKRRLSIALQILTRPTLLFLDEPTTGLDSASAYFVAQTLRNLAHDAKTVISSIHQPSSEVFALFDHLFLLSGGQTVYFGPAQKATQFFAKAGFPCPSRRNPSDHFLHCINSDFDAVTAAITASQTTQEGISLSTAETKAILVEKYRWSEQANTARARIKEISNIEGHDFERKRKSGAKWWKQLSMLTQRSFLNMSRDVGYYWIRITIYIALSLCVGTIFYEVGSSYTAIFARGACGAFISGFMTFMSIGGFPSFIEEMKVFNKERLNGYYGVGVYILSNFISSLPFVTVMSIATGTITYYMVKFRSEFSHFVYICLDLIGCIAVVESSMMIIASLVPNFLMGLIIGAGYIGVMMMTAGYFRRIPDLPKFFWRYPISYINYGAWGLQGAYKNDMIGMEFEPLLPGAPKLKGEFILKSVLGIKIDYSKWWDLGAVVMILIFLRVLFFFILKFKERVGPLFYSIYARQTLHRIKKRPSFRKGPSFPSKRHQSLHPLSSQEGLNSPLH* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0235 681 Pfam ABC transporter 51 201 IPR003439 GO:0005524
Pvu11g0235 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 25 676 - -
Pvu11g0235 681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 274 IPR003439 GO:0005524
Pvu11g0235 681 CDD ABCG_EPDR 27 256 - -
Pvu11g0235 681 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 25 676 - -
Pvu11g0235 681 MobiDBLite consensus disorder prediction 651 681 - -
Pvu11g0235 681 ProSitePatterns ABC transporters family signature. 174 188 IPR017871 GO:0005524
Pvu11g0235 681 Gene3D - 20 269 IPR027417 -
Pvu11g0235 681 Pfam ABC-2 type transporter 231 287 IPR043926 GO:0140359
Pvu11g0235 681 SMART AAA_5 60 250 IPR003593 -
Pvu11g0235 681 MobiDBLite consensus disorder prediction 664 681 - -
Pvu11g0235 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 266 IPR027417 -
Pvu11g0235 681 Pfam ABC-2 type transporter 359 568 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0235 Pvu-Chr11 1811711 1818438 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0235 49 245 Calmodulin-binding Proteins AT2G36910 28.440 6.83e-11 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0235 K05681 - gmx:100788651 1144.41