Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0234 CCTGTCTTGGATTTTATAGAAATGGAGATAGAAGCAGCAACTGCCAATGAAAATGGTGTTGCTGAGTGTGGTGAAACAATGGGAGTTTCAGAGAAGAGAGGGATGTATCTTGTGTGGGAAGATTTAAGTGTTGTGCTTCCAAATTTTGGAAATGGACACACTAAGAGATTGCTTAATGGGTTGAGTGGATATGCTGAACCCAACAAAATCATGGCAATCATGGGTCCTTCTGGCTCTGGAAAATCTACTCTTCTTGATGCCTTGGCAGGAAGACTCTCCAGAAACGTTATCATGTCTGGAAGTGTATTTTTAAATGGAAAGAAGAGGAGATTGGAGTATGGAGGTGCTGCTTATGTGACACAAGAATACACAATGCTGGGAACTCTAACAGTGAGAGAGACAATATATTACTCAGCGAATCTAAGGCTGCCAGGAAGCATGAGGAAAGAAGAGGTGAATGAGAGAATAGAGGGAACAATTATGGAAATGGGTCTTCAAGAATGTGCAGATCGGTTAATAGGGAATTGGCATTTGAGAGGTATAAGCGGTGGAGAAAAGAGAAGGCTAAGCATTGCTCTTGAAATCCTCACAAGACCTACCCTCTTGTTCCTTGATGAACCCACCACTGGTCTTGATAGTGCCTCAGCATATTTTGTTGCTCAAACTCTCAGAAATTTGGCTCATGATGCCAAGACTGTTATCTCTTCTATACACCAACCAAGTAGTGAGGTTTTTGCACTTTTTGATCATCTTTTTCTTCTTTCTGGGGGTCAAACAGTATACTTTGGACCTGCACAAAAGGCAACTCAGTTCTTTGCCAAAGCGGGATTCCCGTGTCCAAGTAGAAGAAACCCTTCTGATCATTTCCTCCGTTGTATCAATTCAGACTTTGACGCTGTCACAGCCACAATCACGGCCTCTCAAACAAGACAAGAAGAAGTATCATTATCAACTGCAGAAATCAAAGCAACACTCGTAGAAAAATACCGATGGTCTGAGTATGCAACCACTGCAAGGGAAAGAATCAAGGAAATATCAAACATAGAAGGACATGATTTTGAAAGTAAAAGCAAATGCGAAACCAAAAGGTGGAAGGAATTATCAATGCTGACTCGGAGATCATGTCTGAACATGTCCAGAGATTTGGGATACTACTGGATAAGGATAACTACCTACGTTGCCTTATCTTTGTGCGTTGGAACAATCTTTCATGGAGTTGGAACGACTTACAGAGCCATTTTTGCGAGAGGATCATGTGCCGGATTTATCTCAGGTTTCATGACATTCATGTCCATTGGGAGCTTCCCTTCTTTCTTAGAAGAAATGAAGGTCTTCTACAAAGAAAGAATGAGTGGTTATTATGGTGTAGGAGTCTATATTCTCTCAAATTTTCTGTCTTCCTTTCCGTTTTTGGCAGTGATGTCCACTGCTACGGGGGCAATAACCTATTATATGGTTTCGTCTCGTCAAGAATTTTCACACTTTCTTTATATCACACTGGATCTTATGGGCTGCATTGCGGTTGTGGAGAGCTCCATGATGATTATAGCTTCACTGGTTCCCAACTTCCTCATGGGATTGACAATTGGAGCGGGATATATTGGTCTTATGATGATGACTTCTGGCTATTTCCGTCGGATCCTTGATCTTCCCAAATTCTTCTGGCGTTACCCAATATCATACATCAATTTCGGCGCATGGGGATTGCAGGGGGCTTTCAAGAATGACTTGATGGGATTGGAGTTTGATCCCTTGGAACCTGGTGGCGCCAAACTGAAAGGAGAATTCATCCTCAAAACCATGCTTGGCATTAAAGTTGATAATTCAAAGTGGTGGGACCTAGCTGCAATCATGATCATCCTCATATTTCTTAGAGTTTTTTCCTTTTTCATTCTCAAATTTAAGGAGAGAGCTGCACCTTTTCTTTATAGCATCTACGCCAGGCTAACTCTGCATCGCTTAAAGAAGCGACCTTCGTTCAGGAAAGGACCATCTTTCCCTTCCAAACGGCACCAATCTCTGCATCCCTTGTCTCCTCCAGAGGATCTCAACTCGCTTATTCATTAG 2067 0.4214 PVLDFIEMEIEAATANENGVAECGETMGVSEKRGMYLVWEDLSVVLPNFGNGHTKRLLNGLSGYAEPNKIMAIMGPSGSGKSTLLDALAGRLSRNVIMSGSVFLNGKKRRLEYGGAAYVTQEYTMLGTLTVRETIYYSANLRLPGSMRKEEVNERIEGTIMEMGLQECADRLIGNWHLRGISGGEKRRLSIALEILTRPTLLFLDEPTTGLDSASAYFVAQTLRNLAHDAKTVISSIHQPSSEVFALFDHLFLLSGGQTVYFGPAQKATQFFAKAGFPCPSRRNPSDHFLRCINSDFDAVTATITASQTRQEEVSLSTAEIKATLVEKYRWSEYATTARERIKEISNIEGHDFESKSKCETKRWKELSMLTRRSCLNMSRDLGYYWIRITTYVALSLCVGTIFHGVGTTYRAIFARGSCAGFISGFMTFMSIGSFPSFLEEMKVFYKERMSGYYGVGVYILSNFLSSFPFLAVMSTATGAITYYMVSSRQEFSHFLYITLDLMGCIAVVESSMMIIASLVPNFLMGLTIGAGYIGLMMMTSGYFRRILDLPKFFWRYPISYINFGAWGLQGAFKNDLMGLEFDPLEPGGAKLKGEFILKTMLGIKVDNSKWWDLAAIMIILIFLRVFSFFILKFKERAAPFLYSIYARLTLHRLKKRPSFRKGPSFPSKRHQSLHPLSPPEDLNSLIH* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0234 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 273 IPR027417 -
Pvu11g0234 688 Gene3D - 27 276 IPR027417 -
Pvu11g0234 688 SMART AAA_5 67 257 IPR003593 -
Pvu11g0234 688 Pfam ABC-2 type transporter 367 575 IPR013525 GO:0016020|GO:0140359
Pvu11g0234 688 Pfam ABC-2 type transporter 238 298 IPR043926 GO:0140359
Pvu11g0234 688 ProSitePatterns ABC transporters family signature. 181 195 IPR017871 GO:0005524
Pvu11g0234 688 Pfam ABC transporter 58 208 IPR003439 GO:0005524
Pvu11g0234 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 32 681 - -
Pvu11g0234 688 MobiDBLite consensus disorder prediction 660 688 - -
Pvu11g0234 688 CDD ABCG_EPDR 34 263 - -
Pvu11g0234 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 32 681 - -
Pvu11g0234 688 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 281 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0234 Pvu-Chr11 1799145 1804310 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0234 40 225 Acyl Lipid Metabolism Gene Families AT1G54350 30.594 2.02e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0234 K05681 - gmx:100806806 1132.47