Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0233 ATGGATAGCTTACAAGCCACTTACAAAGACGAGGAAGATGAAGAAGACGAGGCGCCACCACCCGCCACCGCTATCACCTCCGCCATCACAACCGTCACTACCGCCATCATCTCCACCGACGCCGAATCACCGGAAGCTCCTCCTGCCACCACCAGCACGCCCTCCGATACCCCAACCGAGCATCCCAACGACGCGCGATCAGAACCCGACCCGTCTGACGAACTCTCCGACGATGATGCGGCCTCCGACGGGTCCAAAAAGTCCCCGAAATCCGGCCGTGAAGAAGGCGACGCCTCTGATGAGGAGCCGCCGCCGAAGAAACAGAAGCAGCTCTCCTCTCTAACGGCGGAGGCGGCGAAGGAGGACTCGCCGGTGCCGGCGACGGCGGATGGCGCCAACAACGCGACCACTCCTGCAACGAACGGTTCGGCGCCGAACGCGAAGAAATCGAAGAAGAAGAACAACAACGTGTGGGCGACGAAGTCGACGCGGAAGGGGAAGAAGAAGAACAACCGCAACAACAACACCAACGGCAAAAACGACAACCACGCGAACGGCGAGGACAACGTGCTGATTACGCCGGTGCCGCGGTTCCCCGACAAGAGCGACGACACGGCGGAGATGAAGATTTGTCTGTCGAAGGTGTACAAAGCAGAGAAGGTGGAACTGAGTGAGGACAGAATGAGTGCGGGGAGCACCAAGGGTTACCGAATGGTGAGGGCCACGCGCGGAGTCGTGGAAGGCGCGTGGTACTTCGAGATTAGGGTTGTGAAGTTGGGGGAGAGTGGGCACACGCGCCTTGGGTGGTCAACTGAGAAGGGTGATTTGCAGGCTCCTGTTGGGTACGATGGGAACAGTTTTGGGTATCGGGACATTGATGGGAGTAAGATTCATAAGGCGAGTAAGGAGAAGTATGGAGAAGAAGGGTATAAGGAAGGGGATGTTATTGGTTTCTACATCAATTTGCCGGATGGCAAAAACTATGCCCCCAATACACCTCAGTTGGTCTGGTATAAAGGCCAGCGCTATGTTTGTGCTCAAGATGCTAAGGAAGATCCACCCAAAGCGGTGCCTGGAAGCGAGATATCATTCTTTAAAAATGGCATATGCCAAGGTGTAGCTTTCAAGGATCTCCACGGTGGTCGTTACTATCCTGCCGCATCAATGTTTACTCTCCCCAATGAACCAAACTGCACGGTTAAGTTCAACTTTGGTCCTGAATTTGAATGTTTTCCAGAAGATTTCAATGATCGGCCAATTCCTAGGCCAATGATTGAAGTTCCTTATCATGGTTTTGAGAATCGAGTTGAAAATGGAGAATCTAATGAGAAGAAATCCTAG 1341 0.5362 MDSLQATYKDEEDEEDEAPPPATAITSAITTVTTAIISTDAESPEAPPATTSTPSDTPTEHPNDARSEPDPSDELSDDDAASDGSKKSPKSGREEGDASDEEPPPKKQKQLSSLTAEAAKEDSPVPATADGANNATTPATNGSAPNAKKSKKKNNNVWATKSTRKGKKKNNRNNNTNGKNDNHANGEDNVLITPVPRFPDKSDDTAEMKICLSKVYKAEKVELSEDRMSAGSTKGYRMVRATRGVVEGAWYFEIRVVKLGESGHTRLGWSTEKGDLQAPVGYDGNSFGYRDIDGSKIHKASKEKYGEEGYKEGDVIGFYINLPDGKNYAPNTPQLVWYKGQRYVCAQDAKEDPPKAVPGSEISFFKNGICQGVAFKDLHGGRYYPAASMFTLPNEPNCTVKFNFGPEFECFPEDFNDRPIPRPMIEVPYHGFENRVENGESNEKKS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0233 446 MobiDBLite consensus disorder prediction 173 187 - -
Pvu11g0233 446 MobiDBLite consensus disorder prediction 1 190 - -
Pvu11g0233 446 SMART SPRY_3 247 408 IPR003877 GO:0005515
Pvu11g0233 446 CDD SPRY_Ash2 221 408 - -
Pvu11g0233 446 ProSiteProfiles B30.2/SPRY domain profile. 190 409 IPR001870 -
Pvu11g0233 446 Pfam SPRY domain 250 325 IPR003877 GO:0005515
Pvu11g0233 446 MobiDBLite consensus disorder prediction 79 107 - -
Pvu11g0233 446 SUPERFAMILY Concanavalin A-like lectins/glucanases 210 412 IPR013320 -
Pvu11g0233 446 PANTHER SET1/ASH2 HISTONE METHYLTRANSFERASE COMPLEX SUBUNIT ASH2 17 437 IPR037353 GO:0048188|GO:0051568
Pvu11g0233 446 MobiDBLite consensus disorder prediction 24 60 - -
Pvu11g0233 446 MobiDBLite consensus disorder prediction 129 161 - -
Pvu11g0233 446 Gene3D - 208 422 IPR043136 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0233 K14964 - gmx:100816796 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0233 11 1793962 1799585 Pvu11g0233 11 1793962 1799585 ECH