Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0227 ATGAGCAGCGGCGTAGGAAAGGTGGTGTGTGTCACCGGTGCTTCTGGTTTCATCGCATCGTGGATCGTCAATTTTCTTCTCCAACGCGGTTACACCGTCAGAGCCACTGTTCGAAACCCTAGTAATCGGAAAAAGGTTTTGCACTTGGTTAACCTAGAGGGCGCGAAGGAGAGGTTGCATCTGTTCAAGGCGGATTTGTTGGAAGAAGGTTCGTTCGACTCCGTTGTGGATGGCTGCGACGGTGTTTTTCACACCGCTTCACCTGTCCGTTTCGTAGTGGAAGATCCACAGGCTGACTTGATTGATCCAGCTGTGATGGGAACTCTTAATGTTCTCAAATCATGTGCAAAATCACCATCTGTGAAACGGGTTGTCTTCACCTCTTCTACAGCTGCAGTGGTATATAATGAAAGACCTAAAACTCCTGAAGTTGTAGCTGATGAGACATGGTTTTCAGATCCAGATGTCTGTAGGGAATTAAAGATGTGGTACCATCTTTCAAAGACTTTGGCTGAGGAGGCTGCGTGGAAATTTGTAAATGAAAACAACATCAACATGATTACTATTAACCCAGGAATGGTGGCAGGATCTTTCTTACAACCAGAGGTTAATGAAAGCATTGAGTATATTTTAAACGTAATAAATGGTAAATCAATTCCAAATAAAGCTTTCGGATGGGTCGACGTGAAAGATGTTGCTAACGCTCATATTCTGGCATATGAGATTGCTTCAGCCAGTGGAAGATACTGTTTGACTGAGAAAGTGATACACTCATCTGAACTTGCAAGGATTTTACGTGATCTGTACCCTACATTGCAAATTCCAGATAAGTGTGAGGTGGATGAGCCGTATGTGCAAACATACCAAATTTCCAAAGAAAAGGCAAAGAAGAGCTTGGGAATAGAGCTTACTCCTTTGGAAGTGAGTATCAGGGAAACTGTGGAAAGCTTTAGAGAGAAGAAGATTGTCAACTTTTAA 978 0.4305 MSSGVGKVVCVTGASGFIASWIVNFLLQRGYTVRATVRNPSNRKKVLHLVNLEGAKERLHLFKADLLEEGSFDSVVDGCDGVFHTASPVRFVVEDPQADLIDPAVMGTLNVLKSCAKSPSVKRVVFTSSTAAVVYNERPKTPEVVADETWFSDPDVCRELKMWYHLSKTLAEEAAWKFVNENNINMITINPGMVAGSFLQPEVNESIEYILNVINGKSIPNKAFGWVDVKDVANAHILAYEIASASGRYCLTEKVIHSSELARILRDLYPTLQIPDKCEVDEPYVQTYQISKEKAKKSLGIELTPLEVSIRETVESFREKKIVNF* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0227 325 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 3 323 - -
Pvu11g0227 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 323 - -
Pvu11g0227 325 Pfam NAD dependent epimerase/dehydratase family 9 241 IPR001509 -
Pvu11g0227 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 319 IPR036291 -
Pvu11g0227 325 Gene3D - 7 325 - -
Pvu11g0227 325 CDD FR_SDR_e 9 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0227 Pvu-Chr11 1734375 1740575 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0227 2 325 Miscellaneous Gene Families AT5G19440 66.154 1.92e-161 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0227 - - gmx:100799213 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0227 11 1734375 1740575 Pvu11g0227 11 1734375 1740575 ECH