Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0219 ATGATGGATTGCGGCGTTGGATCCATCGTGTGGGTGCGGCGGAGGAACGGGTCGTGGTGGCCGGGTCAAATCCTCGGCCCCGACGACCTCTCCGCTTCTCACCTCACCTCACCTCGATCCGGAACGCCGGTGAAGCTCCTCGGCAGAGAAGACGCCAGCGTGGATTGGTACAATTTGGAGAAATCCAAGCGTGTTAAGGCATTCCGGTGTGGTGAGTTTGATGATTGTATTGAAAAGGCCGAATCTGCTCAGGGAGGACCGCTGAAGAAGAGAGAGAAGTATGCGCGCCGAGAAGACGCCATTCTTCATGCTCTTGAGCTTGAGAAACAGATTTTGAAGAAGCAAGGGAGATCAGGTGGTAGACCTTCGAATACTTTCAAAAAGGGTGTGTTTGCATCGCCACCTGAAACACTCGGAAATGACAATGAAAACCATGCAAGTTCTTTTATGTATTGTGAAAGTGAGTCTGGTGGAGGTTTCTTTCCTCCGGAGATGGCCAAGGAAGTGGATTATTCTGAAACAACACCTCGGATGAGAGACTTGCAGGATTTTGGGCTCAGAATTCACCCTGCAAAAAAGAAGCTTCCATCTTTTGTTGATCCTAACATTTATCAGAAACGTACGGTTGATGATGGTGCTCGGGCTCTTGCCAGCGGTGGTGTACGCGCTGGGAGTAGTCTTCACATCAATGGGGCTGGGCAAATAGGAGCTTCACGAGCAAAAAGGAGCAGATGTGTGTATTTACCGACCGAGTCCAGTGATTCTCTTGATTACAGAGAGACTCTACCCCGAGTTGAGATGTCACCTTCCCAACGCAGAAGGGAGTTTCCTTATCACGGTTCTATGGTTGGAGAGACTGGATATACTTTTATGGATGACGTTGAATCTGATTCCTCTGAGACAGCTTGTACTGATTCTGATTCTGATTCTGATTCTTCTGAGACAGAACCAGACTTGGATGAAGAGATGACAATATTTTCAGAAAATGGTCATGATGCTGAAGAACACGAAAGCACTAGCAGTGAGGAGCTTGATGAATTAGCAAATTCCAGTGACATGCCTCACCTTTATCCTCGTGACATAATAACATCTAATGAAGCTGTGTCTAAATGGCAACTAAAAGGGAAAAGGAATAATCGGAATCTTGTAAAGAGGTCTGTCGGTGCTTCCGATGGAAAATGTAATATGTATGGAGCAGGAGCAGATGTTGAAGGAAAGAGTAGTAATTTAAGGCACAATAGTCCAAGTTTGCACCGCTACAAATTTGATTTTGGTGATACCTTTGATGACGATGAGCAAAACTTTGGACTGGAAGATGAATACCCTCTATCTTCTAGATCCATATCAAGAAGTCAAAGTAAAATCCATCGTGGTGTACCTTGGAATGATTTGGCCTGGGATGATCATCTAGCTTCTAAAAGACATTGGGATGCTAAACCATATTCTCCATTGTACGGTGACCGTTATCATTTTGGTGGTAGGGTCAGACCGATGCTAGTTAATGTAGATTTGAAGGTTCAAGCAAGCTATCGGAAAGAGTGTGTACCCTTCATTTCTCTCATGAGTAAATTAGATGGGAGGGCAATAGTAGGGCACCCAATCCAGGTTGAGGCTCTCAAGGATGGTTCATCTGATATCCTATTTCCTACAATTGACGACTTCAGTAATGATGTGACTGGTATTGAGGGAAGTAGTGTGCTTCCACCAGCATGGAGGACTGCAAGGAGAACTGCAAATTTTCGCATCCCGCGCCCCCATGCGCAATCATCAAATGGTGCTGAAGGTGCGGCTGAGTTTCCCTCTTCAGATCAAGAACAAAGCTTTGAATATAAAAGTTTAAATGCTGGAAGTTCCAGTCACCAGGCTAGCCTTCAAAAGAGGAGTGGCCTTAAAAGTCATCGATCTTCAGCAGAAAAAAGGTCCTCAAAAAAGGTGCCTAAGAAATTGAGCTTGTCATCTTGCCAAAAAACTAGAACTCTGTCCTCATTATCTACTGAGCATAATTTTAGTAGAAAGCCATTACATGATAGCAGTAGTTATCAAACAGATAGATTGACTAAACCAGACATTTCTGGGTCCACTACAGTAGCTTGCATACCAGTCCAGTTAGTGTTTAGTAGATTACTCGAGAAGATTAATAGGCCTCCATTGAAAACACCTAGTAATGTGGCTTTGCTGAATACTGGTGTGGATAGGAATTCATAG 2205 0.4449 MMDCGVGSIVWVRRRNGSWWPGQILGPDDLSASHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKAFRCGEFDDCIEKAESAQGGPLKKREKYARREDAILHALELEKQILKKQGRSGGRPSNTFKKGVFASPPETLGNDNENHASSFMYCESESGGGFFPPEMAKEVDYSETTPRMRDLQDFGLRIHPAKKKLPSFVDPNIYQKRTVDDGARALASGGVRAGSSLHINGAGQIGASRAKRSRCVYLPTESSDSLDYRETLPRVEMSPSQRRREFPYHGSMVGETGYTFMDDVESDSSETACTDSDSDSDSSETEPDLDEEMTIFSENGHDAEEHESTSSEELDELANSSDMPHLYPRDIITSNEAVSKWQLKGKRNNRNLVKRSVGASDGKCNMYGAGADVEGKSSNLRHNSPSLHRYKFDFGDTFDDDEQNFGLEDEYPLSSRSISRSQSKIHRGVPWNDLAWDDHLASKRHWDAKPYSPLYGDRYHFGGRVRPMLVNVDLKVQASYRKECVPFISLMSKLDGRAIVGHPIQVEALKDGSSDILFPTIDDFSNDVTGIEGSSVLPPAWRTARRTANFRIPRPHAQSSNGAEGAAEFPSSDQEQSFEYKSLNAGSSSHQASLQKRSGLKSHRSSAEKRSSKKVPKKLSLSSCQKTRTLSSLSTEHNFSRKPLHDSSSYQTDRLTKPDISGSTTVACIPVQLVFSRLLEKINRPPLKTPSNVALLNTGVDRNS* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0219 734 PANTHER T17B22.17 PROTEIN-RELATED 2 119 IPR044679 -
Pvu11g0219 734 PANTHER T17B22.17 PROTEIN-RELATED 231 732 IPR044679 -
Pvu11g0219 734 MobiDBLite consensus disorder prediction 259 281 - -
Pvu11g0219 734 Pfam PWWP domain 7 87 IPR000313 -
Pvu11g0219 734 MobiDBLite consensus disorder prediction 581 691 - -
Pvu11g0219 734 MobiDBLite consensus disorder prediction 259 273 - -
Pvu11g0219 734 MobiDBLite consensus disorder prediction 295 356 - -
Pvu11g0219 734 SUPERFAMILY Tudor/PWWP/MBT 5 110 - -
Pvu11g0219 734 ProSiteProfiles PWWP domain profile. 6 61 IPR000313 -
Pvu11g0219 734 MobiDBLite consensus disorder prediction 647 691 - -
Pvu11g0219 734 MobiDBLite consensus disorder prediction 324 338 - -
Pvu11g0219 734 MobiDBLite consensus disorder prediction 298 323 - -
Pvu11g0219 734 MobiDBLite consensus disorder prediction 594 630 - -
Pvu11g0219 734 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 231 732 - -
Pvu11g0219 734 PANTHER PWWP DOMAIN-CONTAINING PROTEIN-RELATED 2 119 - -
Pvu11g0219 734 MobiDBLite consensus disorder prediction 115 139 - -
Pvu11g0219 734 Gene3D - 2 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0219 Pvu-Chr11 1673289 1677007 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0219 - - gmx:102667517 1166.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0219 11 1673289 1677007 Pvu11g0219 11 1673289 1677007 ECH