Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0216 ATGCAAGAACGTAAAAAGGAGTTTGCACCTGCGATTTATGGAGAGATGAATGGCTCCAAGTGCTTTCGTTGGAATGCAAATGCAATGCCTCAATCGTCTTCTCCTCAAACCTTTTCTCTTCCCTCTCCAATCCCTCAATGGTCTCAAGGACAAGGTTTTGCTTCCGGCCTTATAAATCTTGGTGAAATACAAGTTTCCAAGGTCACTAGGTTTGAGTTTATTTGGAGTAGCAGTGGTATGCTAGACACTAAAAAAGCTGTTACATTCTATAGGCCTGTAGAAATACCTGATAGTTTTCGTATTCTTGGTCACTATTGTCAATCCTGTGACAAGCCTTTGAGGGGTTTTGTGCTTGTTGGTAGGGAGGTTGAAACTGCTGATATTTGCAATCAAGATAAGTTACCTCCTATGAAGAATCCCCTTGATTTTAAGTTGGTTTGGGGTGAAAATGCAGCAAGTTTGGAAATTTCAAGCGTATACTTCTGGGTACCTGAACCTCCTGAAGGTTACAAGGCCCTTGGCTGTTTGGTCACTACCAAACATGAGAAGCCTTCATTGGATGAAATGTGCTGTGTGCGTACAGACCTCACTCATAAATGTGAACCATACCGTCAAATACTCACTTCTGGCTCTAGAATTCCAGAGTTTTCATTTCAGGTATGTAGTTTGAGACCTTGTGATCGTGGCATGCTAGGGAAAGGAGTTTGTGTGGGGACTTTTTTCTGCAGCAGTGGGTGGACCATGAGAGAAGATGTCCCTGTTGCATGCTTGAAGAACCTGAATCCTGCAATACTAGCAATGCCAAATCTGCAACAAATACACGCACTTATTAACCATTATGGCCCTACTATTTTCTTTCATCCTCAGGAAATTTACTTGCCATCTTCTGTGGATTGGTTTTTCAACAATGGAGCACTTTTGTACACAAAGGGTGTGTCTAAAGGAGAGAGAATTGATGCAACTGGGTCAAATCTACCTGGTGGGGGATCAAATGATGGCCAGTTTTGGATAGACTTGCCAAGAGATGATAAAAGGGATGTTGTGAAACGTGGGGACTTGAAAAGTGCAAAGCTTTATGTTCATGTGAAGGCTGCTGTTGGTGGAACTTTTACTGACATTGCAATGTGGGTGTTTTGCCCTTTCAATGGACCAGCCACTCTGAAGTTTGGAATTAAGAACATTCCTTTGGGAAGGGTTGGAGAGCATGTTGGTGACTGGGAGCATTTCACACTTCGCATAAGCAACTTCAGTGGAGAGCTTTATAGCATATACTTTTCACAGCACAGTGGTGGTGAATGGGTGGATGCCTGTGACTTGGATTATATTGAAGGCAATAAAGCTATTGTTTACTCATCCAAATGTGGTCATGCAAGTTACCCTCGTCCTGGTACCTGTATCCAAGGTTCTTCAAAACTTGGGATTGGCATAAGGAATGATGCTGCTAGGAGTAATTTGTATGTGGATTCTAGTGTTCACTATGAGCTTGTTGCAGCTGAGTATCTTGAAAATGATGTCACTGAGCCTCAGTGGTTGCAGTTTATGAGAGAATGGGGTCCCAAAATTGTTTATGATTCAAAAACTGAGCTGGATAAGGTAATCAATGCTCTTCCTCGCATGCTTAAATATTCTGTGAAGAACTTGTTTAATAAGTTCCCAGTGGAACTTTATGGTGAGGAAGGTCCCACTGGGCCAAAAGAGAAAAATAATTGGTTAGAGGATGAAAGATGGTGA 1731 0.4211 MQERKKEFAPAIYGEMNGSKCFRWNANAMPQSSSPQTFSLPSPIPQWSQGQGFASGLINLGEIQVSKVTRFEFIWSSSGMLDTKKAVTFYRPVEIPDSFRILGHYCQSCDKPLRGFVLVGREVETADICNQDKLPPMKNPLDFKLVWGENAASLEISSVYFWVPEPPEGYKALGCLVTTKHEKPSLDEMCCVRTDLTHKCEPYRQILTSGSRIPEFSFQVCSLRPCDRGMLGKGVCVGTFFCSSGWTMREDVPVACLKNLNPAILAMPNLQQIHALINHYGPTIFFHPQEIYLPSSVDWFFNNGALLYTKGVSKGERIDATGSNLPGGGSNDGQFWIDLPRDDKRDVVKRGDLKSAKLYVHVKAAVGGTFTDIAMWVFCPFNGPATLKFGIKNIPLGRVGEHVGDWEHFTLRISNFSGELYSIYFSQHSGGEWVDACDLDYIEGNKAIVYSSKCGHASYPRPGTCIQGSSKLGIGIRNDAARSNLYVDSSVHYELVAAEYLENDVTEPQWLQFMREWGPKIVYDSKTELDKVINALPRMLKYSVKNLFNKFPVELYGEEGPTGPKEKNNWLEDERW* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0216 576 Pfam Vacuolar protein sorting-associated protein 62 35 574 IPR009291 -
Pvu11g0216 576 PANTHER - 18 576 - -
Pvu11g0216 576 PANTHER PROCESSING PROTEIN PRP39, PUTATIVE-RELATED 18 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0216 Pvu-Chr11 1656617 1658830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0216 - - gmx:100793026 912.138