Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0214 ATGGCCGCCGAGAAGCTCCGGGATTTGAGTCAGCCGATTGACGTTCCGCTTCTTGACGCCACCGTCGCCGCCTTCTACGGCACCGGATCTAAGGAAGAGAGAAATGCTGCTGATCAGATTCTGCGCGACTTGCAAAACAATCCCGATATGTGGCTACAAGTCATGCATGTTTTGCAAAATACTCACAATCTGAATACCAAGTTCTTTGCCTTACAGGTTCTAGAAGGTGTAATTAAGTATAGATGGAATGCATTACCTGTTGAGCAGAGAGATGGAATGAAAAATTTCATCTCTGATGTCATTGTACAGCTTTCTAGCAATGATGCTTCATTTCGAGCAGAAAGGTTGTATGTCAACAAACTCAATATTATATTAGTTCAGATTTTGAAGCATGAATGGCCGGCAAGATGGCGAAGCTTTATTCCGGACCTTGTCTCTGCAGCTAAAACTAGTGAAACAATTTGTGAGAATTGTATGGCTATATTGAAACTTTTGAGTGAAGAGGTTTTTGATTTTTCAAGAGGCGAGATGACCCAGCAGAAGATTAAAGAGCTTAAACAATCTTTGAACAGTGAATTTCAACTCATTCATGAGCTATGCTTGTATGTGTTATCAGCCTCACAAAGGACTGAACTCATACGTGCGACTCTGTCTACATTGCATGCCTTTTTATCATGGATTCCCTTGGGTTATATATTTGAATCACCATTGCTTGAGACACTTCTAAAATTTTTCCCACTCCCAGCATATAGGAACCTAACACTGCAATGTTTAACTGAGGTGGCATCCCTTCAATTTGGAAATTACTATGATGTGCAGTATGTCAAGATGTATAACATATTCATGGTCCAGTTGCAGAGTATACTCCCACAAAGTTCGGATATTCCCGAGGCATATACAAAGGGTTCAACTGAAGAACAAGCATTTATACAGAATCTGGCACTTTTCTTCACGTCCTTTTTCAAGGTTCACATTCGTGTCCTGGAATCCACTCAAGAGAATATAGCTGCTTTACTAGCAGGCCTTGAATATCTTATCAACATTTCTTATGTGGATGATACTGAGGTTTTTAAGGTCTGTTTGGACTACTGGAATTCCTTGGTATCAGAGCTGTTTGAACCGCACAGAAGTTTAGACAGTCCTGCTGCCGCAGCAACCCTGATGGGACTTCAGGTACCAGCAATGCTCCCTGGTATGGTTGATGGACACGGTTCTCAGCTTCTTCAGCGCCGACAGCTGTATGCTGGTCCCATGTCAAAGTTGAGAATGCTCATGATCTGTCGAATGGCAAAACCTGAAGAAGTTCTCATAGTTGAAGATGAAAATGGGAACATCGTTCGTGAAACCTTGAAGGACAATGATGTTCTTGTTCAGTACAAGATTATGAGAGAGACCCTTATTTATTTGTCACATCTTGACCATGATGATACTGAAAAGCAGATGCTCAGGAAATTAAGTAAACAGCTTAGCGGTGAGGATTGGACATGGAACAATTTAAATACACTATGCTGGGCAATAGGTTCTATATCTGGTTCCATGGTGGAAGAACAGGAAAACAGATTTTTGGTTATGGTTATTCGTGACTTATTAAACCTGTGTGAAATCACCAAGGGAAAAGATAACAAAGCTGTTATTGCAAGTAATATAATGTATGTTGTGGGCCAGTATCCAAGGTTCTTAAGAGCTCATTGGAAATTCCTTAAAACTGTTGTGAATAAATTGTTTGAGTTTATGCATGAGACCCATCCTGGAGTTCAGGATATGGCTTGTGACACATTTCTGAAAATAGTTCAGAAGTGCAAGCGTAAATTTGTGATCACGCAGGTTGGGGAAAATGAACCGTTTGTGTCTGAGCTTCTGACTGGCCTTCCCAACACCATTATGGATCTTGAATCCCATCAAATACATTCCTTTTATGAATCTGTTGGTCACATGATTCAGGCTGAGTCTGATGTGCAGAAGAGAGATGAATATCTTCAGCGGTTGATGGAGCTCCCAAATCAGAAATGGATGGAAATTATAGGGCAGGCTCATCAAAATGTTGAATTTTTAAAGGATCAGGATGTTATCCGGACAGTGCTTAATATATTGCAGACGAATACAAGTGTGGCATCTTCTTTAGGGACATATTTCTTGCCCCAAATCTCGATGATCTTTTTGGACATGTTGAATGTGTACAGAATGTACAGCGAGCTCATTTCAAAAAGTATTACTGAAGGGGGACCTTTTGCATCTAAAACATCCTATGTGAAACTTCTACGTTCTGTTAAGAGGGAGACACTTAAGCTGATTGAGACATTCTTGGACAAGGCAGAAGACCAACCACAAATTGGCAAACAATTCGTGCCTCCAATGATGGATCCTGTTCTTGGAGATTATGCGAGGAATGTTCCTGATGCTAGGGAATCAGAGGTTTTGTCACTGTTTGCCACAATTGTGAATAAATATAAATCTGCAATGATTGAAGATGTACCTCGGATATTTGAAGCTGTCTTTCAGTGCACACTTGAGATGATTACTAAAAATTTTGAAGATTACCCAGAGCATCGCCTCAAGTTCTTCTCCTTACTTCGTGCCATAGCCACTCATTGTTTTCCTGCATTAATATGCTTGTCAAGTCAGCAAATGAAGCTTGTTATGGACTCTATCATATGGGCTTTTCGGCATACTGAAAGAAATATTGCTGAAACTGGTCTGAACCTGTTGTTGGAGATGCTGAAGAAGTTTCAGGGCTCAGAGTTCTGTAATCAGTTTTACCGGACATACTTTTTGACAATTGAACAAGAGATATTCGCCGTCTTAACCGATACTTTTCATAAGCCAGGGTTCAAATTGCATGTCTTGGTGCTTCAGCATTTGTTCTGTTTGCTGGAAACTGGTGTCCTAACTGAACCTCTTTGGGATCCTGCTACTAATCCATCATATTCATACTCAAATAATTCAGCCTTCGTACGGGAGTTTACCATAAAGCTCCTAAGCACCTCATTTCCCAACATGACTGCATCAGAGGTTACTCAATTTGTTAATGGACTCTTTGAGTCAACCAATGATCAATCCACATTTAAAAATCATATACGAGATTTTCTTATTCAGTCCAAAGAATTTTCAGCTCAGGATAACAAAGATCTGTATGCTGAAGAGGCTGCTGCTCAGAGAGAGAGAGAACGACAAAGAATGCTTTCTATTCCTGGGCTTATTGCTCCAAGCGAATTGCAAGATGAAATGGTGGACTCGTAG 3237 0.4053 MAAEKLRDLSQPIDVPLLDATVAAFYGTGSKEERNAADQILRDLQNNPDMWLQVMHVLQNTHNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNFISDVIVQLSSNDASFRAERLYVNKLNIILVQILKHEWPARWRSFIPDLVSAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQKIKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLSTLHAFLSWIPLGYIFESPLLETLLKFFPLPAYRNLTLQCLTEVASLQFGNYYDVQYVKMYNIFMVQLQSILPQSSDIPEAYTKGSTEEQAFIQNLALFFTSFFKVHIRVLESTQENIAALLAGLEYLINISYVDDTEVFKVCLDYWNSLVSELFEPHRSLDSPAAAATLMGLQVPAMLPGMVDGHGSQLLQRRQLYAGPMSKLRMLMICRMAKPEEVLIVEDENGNIVRETLKDNDVLVQYKIMRETLIYLSHLDHDDTEKQMLRKLSKQLSGEDWTWNNLNTLCWAIGSISGSMVEEQENRFLVMVIRDLLNLCEITKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVITQVGENEPFVSELLTGLPNTIMDLESHQIHSFYESVGHMIQAESDVQKRDEYLQRLMELPNQKWMEIIGQAHQNVEFLKDQDVIRTVLNILQTNTSVASSLGTYFLPQISMIFLDMLNVYRMYSELISKSITEGGPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNVPDARESEVLSLFATIVNKYKSAMIEDVPRIFEAVFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALICLSSQQMKLVMDSIIWAFRHTERNIAETGLNLLLEMLKKFQGSEFCNQFYRTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLLETGVLTEPLWDPATNPSYSYSNNSAFVREFTIKLLSTSFPNMTASEVTQFVNGLFESTNDQSTFKNHIRDFLIQSKEFSAQDNKDLYAEEAAAQRERERQRMLSIPGLIAPSELQDEMVDS* 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0214 1078 Pfam CRM1 C terminal 714 1036 IPR014877 GO:0005049
Pvu11g0214 1078 ProSiteProfiles Importin-beta N-terminal domain profile. 37 103 IPR001494 GO:0006886|GO:0031267
Pvu11g0214 1078 Pfam CRM1 / Exportin repeat 2 410 477 IPR041235 -
Pvu11g0214 1078 Pfam Chromosome region maintenance or exportin repeat 337 372 IPR041123 -
Pvu11g0214 1078 PANTHER EXPORTIN 1A-RELATED 4 1078 - -
Pvu11g0214 1078 SUPERFAMILY ARM repeat 22 1027 IPR016024 -
Pvu11g0214 1078 Pfam Importin-beta N-terminal domain 37 103 IPR001494 GO:0006886|GO:0031267
Pvu11g0214 1078 PANTHER EXPORTIN 1/5 4 1078 IPR045065 GO:0005049|GO:0006611
Pvu11g0214 1078 SMART IBN_N_2 37 103 IPR001494 GO:0006886|GO:0031267
Pvu11g0214 1078 Pfam Exportin 1-like protein 115 258 IPR013598 -
Pvu11g0214 1078 Pfam CRM1 / Exportin repeat 3 491 540 IPR040485 -
Pvu11g0214 1078 Gene3D - 1 1061 IPR011989 -
Pvu11g0214 1078 SMART CRM1_C_2 714 1037 IPR014877 GO:0005049
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0214 Pvu-Chr11 1638342 1649908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0214 K14290 - gmx:100802384 2050.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0214 11 1638342 1649908 Pvu11g0214 11 1638342 1649908 ECH