Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0206 ATGTCGTCAAAACCATTCAAGCCAAGCCGGTTATCTCATTCTCAGCCACCAACTTCTGAGGCTTCTGATGGCCAGAAGCCTCCTTTGCCTCCAACCGTGACGTTTGGTCGAAGAACTTCCTCTGGTCGCTACATCAGCTACTCCAGAGATGATCTTGACAGTGAACTTGGGAGTAGTGACTTCATGAATTACACAGTGCATATGCCTCAGACACCTGATAACCAACCTATGGATCCATCAATTTCACAGAAAGTTGAGGAGCAATATGTGTCAAGCTCCCTTTTTACCGGAGGATTCAACAGTGTTACTCATGCCCATCTAATGGATAAGGTGATAGAATCCGAAGCAAGCCATCCACAGATGGCTGGTGCAAAAGGGTCTTCATGTGCAATTCCTGGTTGTGATTGTAAGGTGATGAGTGACGAACGTGGTGTGGATATTCTCCCTTGTGAGTGTGACTTTAAGATATGCAGAGACTGCTATATAGATGCAGTAAAAGCAGGAGATGGAATGTGCCCGGGATGCAAAGAGCCTTACAAAAACACAGAGCTAGATGAAGTTGCTGTGGATGAACGAAATGGTGGAAGGCCATATCCGCTTCCTCCCTCAAGTGGAGTGTCTAAAATGGAGAGGAGATTGTCCTTGATGAAGTCAACAAAGTCAGCATTGATGAGAAGTCAGACTGGAGATTTTGATCACAATCGGTGGCTCTATGAAACAAAGGGTACCTATGGTTATGGCAATGCTATTTGGCCAAAGGGAGGAAATTTTGGAAGTGGAAATGGGGATGATGATGATGTTGTTGAGCCAATGGATCTGATGAACAGACCCTGGAGGCCACTTACTAGGAAACTCAAGATACCTGCTGCTATTCTCAGCCCATATAGACTCATCATATTCATTCGGTTGGTTGTCCTGGTACTCTTCCTCACATGGAGGGTGAAGCACAAAAATAGCGATGCAATCTGGCTATGGGGAATGTCTGTGGTATGTGAGATATGGTTTGCCTTTTCCTGGCTACTGGATCAACTTCCCAAGCTATGTCCAATAAATCGTTCCACAGATCTTAATGTTCTGAACGAAAAATTTGAAGTGCGAAGTCCCAACAATCCTACTGGAAAGTCTGATCTACCAGGCATAGATGTCTTTGTCTCTACCGCTGATCCTGAGAAAGAACCACCTCTTGTCACTGCAAACACCATCTTATCTATCCTAGCCGCAGACTATCCAGTTGAGAAACTTTCTTGCTATGTTTCTGATGATGGAGGCGCACTTCTGACATTTGAGGCAATGGCTGAAGCTGCCAGTTTTGCCAATGTGTGGGTTCCATTCTGCCGTAAGCACAATATAGAGCCTAGGAATCCTGAATCATATTTCAACCTAAAGAGAGATCCCTACAAAAACAAAGTCAAGCCAGATTTTGTCAAGGATCGCAGAAGGGTGAAGCGTGAGTATGATGAGTTCAAGGTCAGGATCAACGGTCTGCCTGACTCTATCCGGCGCCGGTCTGATGCCTTTCATGCAAGAGAGGAATTGAGGGCCATGAAATTGCAGAGACAAAACAAGGTAGATGAACCTGTAGAAGCTTTAAAGATTCCAAAAGCCACATGGATGGCTGATGGAACTCACTGGCCAGGGACTTGGTTGAATCCTTCATCCGAGCACTCTAAGGGTGATCATGCTGGTATAATTCAGGTGATGTTGAAACCTCCAAGTGATGAACCTCTTCTGGGAAATGCAGACGATGAAAAGCTCATTGACTTGGCTGATGTTGATATCCGTCTACCCCTTCTTGTTTATGTTTCTAGAGAGAAACGTCCAGGCTATGATCACAACAAAAAAGCCGGTGCCATGAATGCCTTGGTTCGAGCCTCAGCCATCATGTCAAATGGTCCTTTTATACTCAATCTTGACTGTGATCACTACATCTACAACTCCAAGGCAATGAGGGAAGGTATGTGCTTTATGATGGACCGTGGTGGTGACCGAATTTGCTATGTTCAGTTCCCTCAAAGATTTGAGGGAATTGACCCTTCTGACAGATATGCCAATCACAACACTGTCTTCTTTGATGTCAACATGAGAGCACTTGATGGACTTCAAGGACCAGTCTATGTAGGAACTGGTTGCCTTTTCAGAAGAGTTGCTCTCTATGGTTTTGATCCTCCTCGCTCTAAAGAACACCCTGGCTGCTGTAGTTGCTGCTTTGGCAGAAAAAAGAAGAATGCTAACATCTCCGAAGAGAATCGGTCACTGAGGATGGGTGACTCTGATGAAGAAGAAGAAGAAATGAATCTATCAATGTTCCCTAAGAGATTTGGAAACTCAACTTTGCTTATTGACTCAATCCCAGTGGCAGAGTTTCAAGGCAGGCCACTAGCCGATCACCCTGCAGTGAAGAATGGACGCCCTCCGGGCGCCCTCACCATACCGCGCGAGCTTCTCGATGCATCGACCGTGGCAGAGGCCATCAGTGTGATCTCTTGCTGGTATGAGGACAAAACTGAGTGGGGACAGCGTGTTGGATGGATCTATGGATCAGTTACAGAAGATGTGGTTACCGGCTATAGGATGCACAATAGAGGGTGGAAATCAGTGTACTGTGTTACCAAGCGTGATGCATTTCGTGGCACTGCTCCAATCAATCTCACTGATAGGCTGCATCAGGTCCTTAGATGGGCAACTGGGTCAGTAGAAATATTCTTCTCAAGAAACAATGCACTTCTGGCAAGCCCAAGAATGAAGTTTCTCCAAAGGATTGCATACCTCAATGTTGGAATCTATCCCTTCACTTCCTTTTTCCTGATCGTCTACTGCTTCCTCCCTGCACTTTCCCTCTTCTCTGGCCAATTCATTGTTCAAACTCTCAATGTCACTTTCCTTGTGTATCTCTTGACCATCACTGTGACTTTGTGCATGCTGGCAGTGCTTGAAATCAAGTGGTCTGGCATTGAGCTGGAGGAGTGGTGGAGAAATGAGCAGTTTTGGCTGATTGGAGGAACAAGTGCACACCTAGCCGCTGTGCTGCAGGGTCTGCTCAAAGTGGTAGCAGGCATTGAAATCTCCTTCACCTTGACATCAAAATCTGCTGGGGATGATGTAGACGATGAGTTTGCTGATCTCTATGTTGTGAAGTGGACATCCCTTATGATCCCACCAATCACAATCATGATGGTTAACTTGATAGCAATAGCAGTTGGAGTGAGCAGGACCATATACAGTGTGATACCTCAGTGGAGTCGTCTACTAGGTGGTGTGTTCTTCAGTTTTTGGGTGTTGACTCATCTCTACCCTTTTGCAAAAGGGTTGATGGGAAGGAGAGGAAGAACACCAACCATTGTTTTTGTATGGTCTGGTCTCATAGCAATCACAATATCACTCCTTTGGGTGGCCATCAATCCCCCTGCTGGTACCAACCAGATCGGTGGTTCATTCCAGTTCCCATGA 3447 0.4578 MSSKPFKPSRLSHSQPPTSEASDGQKPPLPPTVTFGRRTSSGRYISYSRDDLDSELGSSDFMNYTVHMPQTPDNQPMDPSISQKVEEQYVSSSLFTGGFNSVTHAHLMDKVIESEASHPQMAGAKGSSCAIPGCDCKVMSDERGVDILPCECDFKICRDCYIDAVKAGDGMCPGCKEPYKNTELDEVAVDERNGGRPYPLPPSSGVSKMERRLSLMKSTKSALMRSQTGDFDHNRWLYETKGTYGYGNAIWPKGGNFGSGNGDDDDVVEPMDLMNRPWRPLTRKLKIPAAILSPYRLIIFIRLVVLVLFLTWRVKHKNSDAIWLWGMSVVCEIWFAFSWLLDQLPKLCPINRSTDLNVLNEKFEVRSPNNPTGKSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANVWVPFCRKHNIEPRNPESYFNLKRDPYKNKVKPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAFHAREELRAMKLQRQNKVDEPVEALKIPKATWMADGTHWPGTWLNPSSEHSKGDHAGIIQVMLKPPSDEPLLGNADDEKLIDLADVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAIMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRICYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRVALYGFDPPRSKEHPGCCSCCFGRKKKNANISEENRSLRMGDSDEEEEEMNLSMFPKRFGNSTLLIDSIPVAEFQGRPLADHPAVKNGRPPGALTIPRELLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPRMKFLQRIAYLNVGIYPFTSFFLIVYCFLPALSLFSGQFIVQTLNVTFLVYLLTITVTLCMLAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVVAGIEISFTLTSKSAGDDVDDEFADLYVVKWTSLMIPPITIMMVNLIAIAVGVSRTIYSVIPQWSRLLGGVFFSFWVLTHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGTNQIGGSFQFP* 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0206 1148 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 36 1146 - -
Pvu11g0206 1148 MobiDBLite consensus disorder prediction 1 41 - -
Pvu11g0206 1148 Pfam Cellulose synthase 380 1139 IPR005150 GO:0016020|GO:0016760|GO:0030244
Pvu11g0206 1148 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 36 1146 - -
Pvu11g0206 1148 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 581 721 IPR029044 -
Pvu11g0206 1148 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 196 IPR013083 -
Pvu11g0206 1148 MobiDBLite consensus disorder prediction 1 22 - -
Pvu11g0206 1148 SUPERFAMILY Nucleotide-diphospho-sugar transferases 395 942 IPR029044 -
Pvu11g0206 1148 SUPERFAMILY RING/U-box 117 183 - -
Pvu11g0206 1148 Pfam RING/Ubox like zinc-binding domain 131 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0206 Pvu-Chr11 1578058 1583372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0206 2 1148 Glycosyltransferase AT3G03050 83.624 0.0 2017
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0206 K20924 - gmx:100792604 2150.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0206 11 1578058 1583372 Pvu2g0415 2 3841996 3847312 ECH
Pvu11g0206 11 1578058 1583372 Pvu11g0206 11 1578058 1583372 ECH