Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0201 ATGGCGGTTAGTTGCATGCCTCTTCGATCCTTACTTTCTCTCATGATTTTGTTTATACCTAAAAGGAACAGATTTAAGGGTGTCTTGTTAATATTTGAGGAAATAGAAAACAGAAAACAAGAAGACGAGGTGAGATCGGTGAAAGTGAGCAACATCTCTTCAGGTGCAACCGAGCAAGATTTGAGGGAATTTCTTACATTTCCTGGGAAAATTGAGTACATTGAAATGCAAAGTGACAAGGGAAGTCCCCAAGTTGCTTATGTTACCTTCAGTAATCCAGAGGGAGCAGAAACTGCAGTTCTTCTCTCGGGAGCAGTTGTGTGTGGACAGTCTCTGAACATTGATTTGGCTAAGGACTATGCGCTGCCTGCTTCGGCCGCATCTGCAGCAGCACAACAGACTACTAACGCTGAGAGTGGGGAATCTGGTTTGAGGAAGGCAGAGGATGTTGTAACCAGCATGGTAGCCAAGGGCTTCATTTTGGGTAAAGATGCATTGAATCGAGCAAAATCCTTTGATGAGAGGCACCAGCTTTCTTCCACAGCCACAGCAAAAGTTGCTTCTTTTGACCAGAAGGTTGGTTTTACTGAAAAGATCAGTGCTGGTACAGTTATGGTGAATGACAAGGTGAAAGAAATGGATCAGAAATTTCAAGTCTCAGAGAAGACTAAATCTGCAATTTCAGTAGCTGAGCAGTCAGTGTCCAATGCTGGATCTGCCATAATGAAGAATCGGTATGTGTTGACTGGGGCTACTTGGGTCACAGGTGCTTACAACAGGGTTGCTAAGGCAGCTGAGGAAGTGGGACAGAAAACTAAGGAGAAGGTTTTGGCACAGGATAATCAAGGAAAGACTGAACAAGGTAATGTCCAAACCACCGGGTCGGTACCCACCACTCCTGATCAAACCTCCAAAGAAGCAACCACAATCAATGAACCCTCAAAACCTGAACCTCAACAGGCCACCACAGTTGATCAAACCTCAAAATCTGAAACTCAGCAGGCCATCACAGTTAATGAACCCTCCAAACCTGAACCTCAAGTGGCCACCACAGTTAACGAACCCTCCAAATCTGAACCTCAAGTGGCCACCACAGTTAACGAACCCTCCAAATCTGAACCTCAAGTGGCCACCACAGTTAACGAACCCTCCAAACCTGAACCTCAACAAGCAACCAAGGATGGTCAATCTCCCAGTCCTGCAACAACTACAGCCTGA 1218 0.4557 MAVSCMPLRSLLSLMILFIPKRNRFKGVLLIFEEIENRKQEDEVRSVKVSNISSGATEQDLREFLTFPGKIEYIEMQSDKGSPQVAYVTFSNPEGAETAVLLSGAVVCGQSLNIDLAKDYALPASAASAAAQQTTNAESGESGLRKAEDVVTSMVAKGFILGKDALNRAKSFDERHQLSSTATAKVASFDQKVGFTEKISAGTVMVNDKVKEMDQKFQVSEKTKSAISVAEQSVSNAGSAIMKNRYVLTGATWVTGAYNRVAKAAEEVGQKTKEKVLAQDNQGKTEQGNVQTTGSVPTTPDQTSKEATTINEPSKPEPQQATTVDQTSKSETQQAITVNEPSKPEPQVATTVNEPSKSEPQVATTVNEPSKSEPQVATTVNEPSKPEPQQATKDGQSPSPATTTA* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0201 405 MobiDBLite consensus disorder prediction 281 405 - -
Pvu11g0201 405 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 43 299 - -
Pvu11g0201 405 SUPERFAMILY RNA-binding domain, RBD 37 120 IPR035979 GO:0003676
Pvu11g0201 405 MobiDBLite consensus disorder prediction 276 405 - -
Pvu11g0201 405 PANTHER BINDING PARTNER OF ACD11 1 43 299 - -
Pvu11g0201 405 SMART rrm1_1 46 115 IPR000504 GO:0003723
Pvu11g0201 405 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 48 111 IPR000504 GO:0003723
Pvu11g0201 405 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 45 119 IPR000504 GO:0003723
Pvu11g0201 405 Gene3D - 33 122 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0201 Pvu-Chr11 1557233 1560215 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0201 - - vun:114170544 492.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0201 11 1557233 1560215 Pvu11g0201 11 1557233 1560215 ECH