Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0196 ATGGCTTCAAAATCAAGACCCAATCTATCTGAAAATCCCAGCAAAGGATCAATGGCAGCTCCTAGAATCAGTAAAGCTAGCAAAGTGGTGTCTAAATCAGAATCTGAGTCACCATCCCCTTTGCAAAATTCGCGACTTTCTGTGGAACGATCTCCACGATCTGTTAATTCAAAGCCAACGATTGAGCGGAAATCACCACGACCCTCTGCCACCCCACCTGATAAACAACCCCCCAGAGCTGCAAAGGGTTCAGAGTTGCAGAACCAATTGAATCTTGCTCAAGAAGACCTAAAGAAAGCAAAGGAGCTGCTCATTCAAGCTGAGAAGGAGAAGCTAAAAGCAATTGATGAGTTGAAAGAGGCACAGAGAGTGGCTGAGGATGCAAATGACAAACTCAGGGAAGCATTGGTGGCTCAAAAACGTGCTGAGGAGAATTCTGAGATTGAGAGATTCCGAGCTGTGGAATTGGAGCAGGCTGGTATTGAAAGTGTGAAGAAAAAGGAAGAAGAATGGCAGAACGAGATTGAAAGTGTCAAGAACCAACATGCTTTGGACATGGCTGCTCTTCTCTCCACCACGCAGGAGCTTCAGCGGGTTAAACAAGAACTTGCCATGACTTGTGATGCAAAGAACCAGGCATTGAATCATGCTGATGATGCAACTAAAATTGCCGAGATTCAGGCAGAGAAAGCAGAGTTTTTATCAGCTGAATTGATGCGATTGAAGACCTTACTAGATGCAAAACTCGAAACGGAGGGTGGTGAAAATCAGGTTATATCGAAACTAAAAACAGAGATATCAGCTCTCAATGATGAACTTGAAAAAGCAAAGGGTTATAGCGATAAGTTGTCAGAGAAAGAAACTTTTATTGAACAGCTTAATGTGGAGCTTGAAGCTTCAAAAATGGCTGAATCTTATGCCCGTAGCCTGCTAGAGGAGTGGAATAAGAAGGTTGAGGAACTGGAAATGAGAATTGAAGAAGCAAACAAACTGGAGAGATCAGCATCAGAGTCTTTGGAATCTGTAATGAAACAGCTAGAAGGAAGCAATGATTTGTTGCATGAAGCAGAATCTGAAGTTACTACTCTTAAAGAGAAGGTAGGATTATTAGAAATGACAATTGGGAGACAGAGAGCTGATGTTGAGGATTCAGAACGCCAACTTCGCACGGCCAAGGAAGAAAGTCTTGAAAAGTCAAAGGAAGTTGAGGCTCTGAAGTCTGAAATTGAGAAGGTTAACGAAGAGAAAGCCCAGGCTTTGAACGATGAAAAGCTTGCTGCTTCTAGTGTGCAGACCTTATTAGAAGAGAAAAACAAACTTATCAGTGAATTGGAGAATTCTAGAGATGAAGAAGAAAAGAGTAAAAAGGCAATGGAAAGCTTAGCTTCTGCATTACATGAAGTATCTGCAGAAGCCAGAGAAGCTAAGGAAAATCTACTAAACACCCAAGCTGAACGTGAAAGCTATGAGGCTCAGATTGAAGATTTGAAGTTAGTATTAAAAGCCACCAATGAAAAATACGAGTCCATGCTTGATGAGGCACGACATGAGATTGATGTTCTTGTATGTAGTATTGAAAATTCCAAGAGTGTCTTTGAGAACTCCAAGGTTGAGTGGGAGCAGAGAGAGCTTCATCTGGTCAGCTGCATAAAGAAAAATGAAGAAGAGAAGGTATCTCTAGAAAAAGAAATAAAAAGATTGCTTTACTTGCTTAAAGAAACCGAAGAAGAAGCTAATATCAACAGGGAGGAAGAAGCCCAGTTGAAGGAAAATTTGAAGGAAGTTGAGGCTGAGGCAATTCAGCTGCAGGAAGCTCTGAAGGAATCAACAGCTGAGAACATGAAATTGAAGGAGAATTTATTGGATAAAGAAAATGAGTTGCAGAGTATGTTTGAAGAAAATGATGAACTTCGGATCAGGGAATCTGAATCTATCAAGAAGGTGGAGGAGTTATCCAAGTTGTTGGAAGAAGCTACAACCATAAACCACCCTGAGGAAAATGGGGATCTCACTGACAGTGAGAAAGACTATGATTTGCTTCCTAAAGTAGTTGAATTTTCTGAAGAGAATGGACATGTAGGAGAGGACATTTCAAAGGTAGAGCTGCCATTGAATCAGGAGGAACTCCAACAAAACACAGCAGAAGAAAGCATTCTGTCGAACGACAAGGCTGCAAATATTGCAGCTCCCAAACCTGAGGAAGTGAGTGAAAAAGTGAAGGAAGAAGAGACCAAAGAAAAGGAGGATTCAGTAGAAGTTGAATTTAAAATGTGGGAGAGCTGCAAGATAGAGAAAAAGGAGTTCTCTCCGGAGAGAGAAGCAGAACCTGAATCACTTGAAGAGGAAGTTGACTCAAAGCTAGAACCTGAATCACTTGAGAGCTTTGATAAGATAAATGGAAATGCTGTAACAGAGAACATTGATGAACCAAAACAACAACAATTGAAGAAGAAGAAAAAGCCTTTACTTGGCAAGTTTGGAAGCCTGCTCAAGAAAAAGGGTGCTGCTGGGAACCAGAAATAG 2523 0.4126 MASKSRPNLSENPSKGSMAAPRISKASKVVSKSESESPSPLQNSRLSVERSPRSVNSKPTIERKSPRPSATPPDKQPPRAAKGSELQNQLNLAQEDLKKAKELLIQAEKEKLKAIDELKEAQRVAEDANDKLREALVAQKRAEENSEIERFRAVELEQAGIESVKKKEEEWQNEIESVKNQHALDMAALLSTTQELQRVKQELAMTCDAKNQALNHADDATKIAEIQAEKAEFLSAELMRLKTLLDAKLETEGGENQVISKLKTEISALNDELEKAKGYSDKLSEKETFIEQLNVELEASKMAESYARSLLEEWNKKVEELEMRIEEANKLERSASESLESVMKQLEGSNDLLHEAESEVTTLKEKVGLLEMTIGRQRADVEDSERQLRTAKEESLEKSKEVEALKSEIEKVNEEKAQALNDEKLAASSVQTLLEEKNKLISELENSRDEEEKSKKAMESLASALHEVSAEAREAKENLLNTQAERESYEAQIEDLKLVLKATNEKYESMLDEARHEIDVLVCSIENSKSVFENSKVEWEQRELHLVSCIKKNEEEKVSLEKEIKRLLYLLKETEEEANINREEEAQLKENLKEVEAEAIQLQEALKESTAENMKLKENLLDKENELQSMFEENDELRIRESESIKKVEELSKLLEEATTINHPEENGDLTDSEKDYDLLPKVVEFSEENGHVGEDISKVELPLNQEELQQNTAEESILSNDKAANIAAPKPEEVSEKVKEEETKEKEDSVEVEFKMWESCKIEKKEFSPEREAEPESLEEEVDSKLEPESLESFDKINGNAVTENIDEPKQQQLKKKKKPLLGKFGSLLKKKGAAGNQK* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0196 840 Coils Coil 311 422 - -
Pvu11g0196 840 Coils Coil 550 640 - -
Pvu11g0196 840 MobiDBLite consensus disorder prediction 378 402 - -
Pvu11g0196 840 PANTHER WEB FAMILY PROTEIN-RELATED 11 836 - -
Pvu11g0196 840 Coils Coil 427 517 - -
Pvu11g0196 840 MobiDBLite consensus disorder prediction 28 64 - -
Pvu11g0196 840 Coils Coil 83 145 - -
Pvu11g0196 840 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 11 836 - -
Pvu11g0196 840 Coils Coil 259 286 - -
Pvu11g0196 840 MobiDBLite consensus disorder prediction 1 17 - -
Pvu11g0196 840 MobiDBLite consensus disorder prediction 733 749 - -
Pvu11g0196 840 Coils Coil 161 181 - -
Pvu11g0196 840 MobiDBLite consensus disorder prediction 712 749 - -
Pvu11g0196 840 MobiDBLite consensus disorder prediction 765 840 - -
Pvu11g0196 840 MobiDBLite consensus disorder prediction 1 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0196 Pvu-Chr11 1523661 1527689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0196 - - gmx:100777446 1290.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0196 11 1523661 1527689 Pvu11g0196 11 1523661 1527689 ECH