Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0177 ATGGACACCGTGGCACGCATCCCAAACAACTCTCCAATTTCATGCATCCACACGTTTCGCTCCCAATCCCCTCACTTCCCAACCTCTTCCGCCGCAATCCGGGTCGGGCGCGGATCTTGGACTCCGATTCGGGCGTCCACGGCGGAGAGAGAGGAGGTGCTACTGGCACCGCCACGCAAGGAGGACCAGCAGCTGAAGAACGGAATAGCCGAGTTCTACGACGAGTCGTCTTCCTTATGGGAGAATATTTGGGGCGACCACATGCACCATGGCTTCTACGACCCGGATTCCACCGTCTCGGTTTCGGATCATCGCGCCGCTCAGATCCGAATGATCGAAGAGTCGCTTCGTTTTGCCTCTGTTTCTGAGGAGCGTGCGAAATGGCCAAAGAGAATAGTTGATGTTGGGTGTGGCATAGGGGGCAGTTCCAGATACTTGGCCGAGAAATTTGGGGCAAGCAGTGTTGGCATCACTCTCAGTCCTGTTCAGGCTCGAAGAGCTAATGCTCTTGCTGCTGCTCAAGGATTGACTCACAAGGTTTCTTTTCAGGTTGGTGACGCTCTGGAGCAACCATTCCCTGATGGGAAGTTTGATCTGGTGTGGTCCATGGAGAGTGGAGAGCATATGCCTGACAAAACCAAGTTTGTTGGAGAGTTGGCTCGGGTAGCAGCGCCTGGTGGCACCATAATAATAGTAACATGGTGCCACAGGGATCTTGGCCCTGATGAACAGTCCCTACAACCATGGGAGCAAGATCTGTTGAAGAAGATTTGTGATGCATATTATCTTCCAGCTTGGTGTTCAGCTGCTGATTATGTCAAATTGCTTCAATCCTTGTCACTTCAGGATATAAAGTCAGAAGATTGGTCTTCCTTTGTTGCTCCATTTTGGCCAGCAGTGATACGCTCAGCCTTGACATGGAAGGGTCTCACTTCACTCTTGAGCAGTGGACAAAAAACGATAAAAGGAGCTTTGGCTATGCCATTGATGATAGAGGGATACAAAAAGGGTCTAATTAAGTTTGCGATCATTACTTGTCGAAAACCTGAATAA 1053 0.5024 MDTVARIPNNSPISCIHTFRSQSPHFPTSSAAIRVGRGSWTPIRASTAEREEVLLAPPRKEDQQLKNGIAEFYDESSSLWENIWGDHMHHGFYDPDSTVSVSDHRAAQIRMIEESLRFASVSEERAKWPKRIVDVGCGIGGSSRYLAEKFGASSVGITLSPVQARRANALAAAQGLTHKVSFQVGDALEQPFPDGKFDLVWSMESGEHMPDKTKFVGELARVAAPGGTIIIVTWCHRDLGPDEQSLQPWEQDLLKKICDAYYLPAWCSAADYVKLLQSLSLQDIKSEDWSSFVAPFWPAVIRSALTWKGLTSLLSSGQKTIKGALAMPLMIEGYKKGLIKFAIITCRKPE* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0177 350 PANTHER CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 50 344 - -
Pvu11g0177 350 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 63 349 IPR029063 -
Pvu11g0177 350 Gene3D Vaccinia Virus protein VP39 74 349 IPR029063 -
Pvu11g0177 350 PANTHER METHYLTRANSFERASE 50 344 - -
Pvu11g0177 350 Pfam Methyltransferase domain 133 231 IPR013216 GO:0008168
Pvu11g0177 350 CDD AdoMet_MTases 131 234 - -
Pvu11g0177 350 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 56 350 IPR025774 GO:0008168|GO:0032259
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0177 Pvu-Chr11 1351788 1354924 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0177 130 235 Acyl Lipid Metabolism Gene Families AT1G73600 36.792 2.47e-17 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0177 K05928 - gmx:732543 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0177 11 1351788 1354924 Pvu11g0177 11 1351788 1354924 ECH