Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0176 ATGGCACTGGAGCAGCACGAGAAGGAGAAGCTGCAGAAGGGAATCGCTGAGTTCTACGACGAGTCTTCCACCTTATGGGAGAATATCTGGGGCGACCACATGCACCACGGCTTCTACGACGCGGATTCCACCGTTTCGGTTTCGGATCATCGTGCTGCTCAGATCCGAATGATCGAAGAGTCGCTTCGTTTTGCCTCGTTTTCTGAGGATGATACTAAATGGCCGAAAAGAATAGTTGATGTTGGGTGTGGAATAGGGGGCAGCTCCAGATACTTGGCCCAGAAATTTGGAGCAACCAGCGTTGGCATCACTCTCAGTCCTGTTCAAGCTCAAAGAGCTAATGCTCTTGCTGCAGCTCAAGGATTGGCTCACAAGGTTTCTTTTCAGGTTGCTGACGCTCTCGAACAACCATTCCCTGATGGGAAGTTTGATCTGGTGTGGTCCATGGAGAGTGGAGAGCATATGCCTGACAAAACCAAGTTTGTTAGAGAGTTGGGTCGGGTAGCAGCACCTGGTGGCACCATAATAATAGTAACATGGTGCCACAGGGATCTTGGCCCTGATGAACAGTCCCTACAACCATGGGAGCAAGATCTGTTGAAGAAGATTTGTGATGCTTATTATCTTCCAGCCTGGTGCTCAGCTGCTGATTATGTCAAATTGCTTCAATCCCTCTCACTTCAGGATATCAAGTCAGAAGATTGGTCTTCCTTTGTTGCTCCGTTTTGGCCAGCAGTGATTCGTTCTGCATTGACATGGAATGGCCTCACTTCACTCTTGCGCACAGGACTGAAAACCATTAAAGGAGCTTTGGCCATGCCATTGATGATAAAAGGATACAATAAGGGTTTGATTAAGTTTGTGATCATTACATGTAGGAAGTCTGGATAA 891 0.4759 MALEQHEKEKLQKGIAEFYDESSTLWENIWGDHMHHGFYDADSTVSVSDHRAAQIRMIEESLRFASFSEDDTKWPKRIVDVGCGIGGSSRYLAQKFGATSVGITLSPVQAQRANALAAAQGLAHKVSFQVADALEQPFPDGKFDLVWSMESGEHMPDKTKFVRELGRVAAPGGTIIIVTWCHRDLGPDEQSLQPWEQDLLKKICDAYYLPAWCSAADYVKLLQSLSLQDIKSEDWSSFVAPFWPAVIRSALTWNGLTSLLRTGLKTIKGALAMPLMIKGYNKGLIKFVIITCRKSG* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0176 296 Gene3D Vaccinia Virus protein VP39 20 294 IPR029063 -
Pvu11g0176 296 Pfam Methyltransferase domain 79 177 IPR013216 GO:0008168
Pvu11g0176 296 PANTHER METHYLTRANSFERASE 4 290 - -
Pvu11g0176 296 PANTHER CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 4 290 - -
Pvu11g0176 296 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 1 296 IPR025774 GO:0008168|GO:0032259
Pvu11g0176 296 CDD AdoMet_MTases 77 180 - -
Pvu11g0176 296 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 294 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0176 Pvu-Chr11 1342914 1347107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0176 71 187 Acyl Lipid Metabolism Gene Families AT1G73600 36.752 7.75e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0176 K05928 - gmx:100778509 517.694