Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0167 ATGGCGTCGTATCTCGCAGCAAAGCGCTTCTTCTCCTCTTCTCTCCTCTCCAAGTCTCTCCTTCCTCCCGCCGCTTCCGCCTCTCGCTCTGTGCACACCAATGCCATGCACAACTACGACGACGACCAGAACGTCGAATTCGAAAGTCGTTCAGAACGCTCTTTCCCTCGCACCGCGCGTCGCGACTGTACCTTCTCAGACGTGCTGGTGCTGAATCCGTTTTTTCCTGCTTGGAGTTTAAGCCAGAGTCTGAACATGATGGATCAGTTCAAGCACAATCCATTCCTCTCTGCGCCGCGCGGTATCGGAGCCGGAGCCGGAGTCCGTCCCGGAGCCGGAGACCGTTCGGGTGCCGGAGACCGTCCCGGTGCTGGAGACCGTCCCGGATTCCGTGGCAGATTGGAATCGAGAGAGACGGAAGATGCTCTGCTTCTCCGCGTGAACATGGCTGGGTTTGGCAAGGAGGACGTGAAGATCTTCGTGGGGAAGAACAGTCTTACTATCAAAGGTGAAGATGCCAAAGAAGGCGAGGAAGAGAGCGCTCCTTGTTATGTTAAGATTGGCTTGCTGTCCATGTTTTACAAGGTAGATCATATCAAAGCTGAGATGAAGAATGGTGTACTGAAGATCATTTTGCCTAAGATCAAGGAGGAGGAGATGACAGATGTGATCAATGTTATCGTTGACTAG 690 0.5319 MASYLAAKRFFSSSLLSKSLLPPAASASRSVHTNAMHNYDDDQNVEFESRSERSFPRTARRDCTFSDVLVLNPFFPAWSLSQSLNMMDQFKHNPFLSAPRGIGAGAGVRPGAGDRSGAGDRPGAGDRPGFRGRLESRETEDALLLRVNMAGFGKEDVKIFVGKNSLTIKGEDAKEGEEESAPCYVKIGLLSMFYKVDHIKAEMKNGVLKIILPKIKEEEMTDVINVIVD* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0167 229 MobiDBLite consensus disorder prediction 106 133 - -
Pvu11g0167 229 CDD ACD_sHsps-like 137 214 - -
Pvu11g0167 229 Gene3D - 81 228 IPR008978 -
Pvu11g0167 229 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 7 228 IPR044656 -
Pvu11g0167 229 Pfam Hsp20/alpha crystallin family 136 226 IPR002068 -
Pvu11g0167 229 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 7 228 - -
Pvu11g0167 229 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 125 229 IPR002068 -
Pvu11g0167 229 SUPERFAMILY HSP20-like chaperones 129 220 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0167 Pvu-Chr11 1270147 1271173 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0167 K13993 - gmx:547852 204.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0167 11 1270147 1271173 Pvu11g0167 11 1270147 1271173 ECH