Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0166 ATGGCGTCCTCTCTCGCTGCGAAGCGCTTCCTCTCTTCTTCTCTACTCTCCAAGTCTCTCCTTCGTCCCGCCGCCTCCGCCTCTCGCTCTTTCAACACCAACGCCATGCGCCACTATGACGACCAGAACGTCGACGTCGAAAGTCGCTCAGAACGCTCTTTCCCTCGCACCGCGCGTCGCGACGATGTCTTCTCAGGCGTGCTGGATCCGTTTTTTCCTACTCGGAGCTTGAGCCAGGTTCTGAACATGATGGATCAGTTCATGGACAATCCTTTCCTCTCTGCGCCGCGCGGTATCGGAGCCGGAGCCGGAGTCCGTCGCGGATGGGACGCGAGAGAGACGGAAGATGCTCTGCTTCTCCGCGTGGACATGCCTGGACTTGGCAAGGAAGACGTGAAGATCTCCGTGGAGCAGAACACTCTTACTATCAAAGGTGAAGGTGCCAAAGAAGGCGACGAGGAAGAGAGCACTCGTCGCTATACTAGCAGAATTGACTTGCCGGACAAGGTCTACAAGGTAGATGATATCAAAGCTGAGATGAAGAACGGTGTGCTGAAGGTCGTTTTGCCTAAAATGAAGGAGGAGGAGAGAAGAGATGTGATCAATGTCAATGTTGAGTAG 621 0.5443 MASSLAAKRFLSSSLLSKSLLRPAASASRSFNTNAMRHYDDQNVDVESRSERSFPRTARRDDVFSGVLDPFFPTRSLSQVLNMMDQFMDNPFLSAPRGIGAGAGVRRGWDARETEDALLLRVDMPGLGKEDVKISVEQNTLTIKGEGAKEGDEEESTRRYTSRIDLPDKVYKVDDIKAEMKNGVLKVVLPKMKEEERRDVINVNVE* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0166 206 PANTHER 23.6 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 205 - -
Pvu11g0166 206 CDD ACD_sHsps-like 110 191 - -
Pvu11g0166 206 Gene3D - 64 205 IPR008978 -
Pvu11g0166 206 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 100 206 IPR002068 -
Pvu11g0166 206 Pfam Hsp20/alpha crystallin family 111 205 IPR002068 -
Pvu11g0166 206 PANTHER 23.5 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 1 205 IPR044656 -
Pvu11g0166 206 SUPERFAMILY HSP20-like chaperones 77 198 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0166 Pvu-Chr11 1267957 1269043 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0166 K13993 - gmx:547852 300.441