Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0141 ATGAGTCAATCAAACTTCAATCTCTCTTCTCAAATTTTATCACGTAGATCTGCACACTATAAACCAAACATTTGGAAATACCAATTTCTCCAGTCACTTGGCAGCAAATATCATAAGGATGAATTTGTTGCAGTGTTAAACAAGAGAATGATGGAAGTGAAGAGTGTATTTGTACAAGAGAAGGATATTTTTAAAAAATTAGAGTTGGTTGATTGGATCCAAAAACTAGGCCTTGCCAACCATTTTCAAAAGGAAATAAATGGCTTTCTTGAATCTTTAGCAGTTCATGTCAAAACCAGCACTTTCAATCTTAGTTCAGAACATTTGCACCTATCTGCATTATCCTTCAGGCTTCTAAGAAATCATGGATATGCAGTTTTGCCAGATATATTAAGCAAGTTCTTAGATAAAAAGGGTGATGTGATGAGGACAATTAGCCCACATGTTGGTGATGTTAAAGATGTTGTGGAGCTTTTGGAGGCCTCACATTTAGGCTTGGAAGGAGAAAAGATAATGGATGAGGCAAAAATTTGTGCCACAAATTCTCTCAATTCCATCAAGAAGGACCAACTATCTAATAATGTAGATGTTGAAAGAATGGTCCACTCATTGGAGCTTCCCTCCCATTGGAGAGTACAATGGTTTGAAGTGAAATGGCACATAAAGCAATACAACAAGGAGAAAAATATGGACCCCATTTTACTTGAAATGTCTAAATTAAATTTCAATATGATTCAGGCCACACTTCAATTGGAGCTCAAGGAATTATCCAGGTGGTGGGAGAATCTTAGCATAAAAGAGGAATTGAGCTTTGCAAGGAATAGGTTGGTTGAAAGCTTCATGTGTGCAGCAGGAGTTGCTTTTGAGCCCAAGTACAAATCCATCAGAAAATGGCTCACCAAAGTTATTGTTTTGGTACTAGTCATTGATGATGTTTATGATATACATGCCTCATTTGAAGAGTTGAAGCCCTTCACAATGGCATTTGAGAGATGGGACGACACAGAACTTGAAGAACTCCCAACGTACATGAGAACATGCATCCATGCACTTCAAGATGTCACAAATGAAATTGCTTATGAAGTTGGAGGAGAACATAACTTTCACTTGGTGTTAACTTACCTAAAGAAAACGTGGATAGAGTTTTGCAAAGCATTATACAAGGAGGCAAAGTGGTACAACATGGGATACATTCCATCCCTGCAAGAATATTTAAGCAATGCATGGATTTCATCTTCAGGGCCTGTAATTTTACTGCATTCGTATCTTGGTACAATGTACCAAGTTAAAGATTCCATGGACCATTTTCTACAGACATACGAGGATTTGGTGTACAATGTTTCCCTTGTGATCAGACTTTGCAATGATTTAGGAACCAGTGTGGCTGAAAGAGAAAGGGGTGATGCAGCTTCTTCAATCGTATGCTATATGAATGAAAAGGGTGTTTCAGAGGTAAAAGCAAGAAAGCATATCCAAGATAAAATTCTTGAAGCATGGAAGAAGATAAACAAGAAGTGTTTTGCTTCTTCTTCTTCTTCTTGTTGTGTGGAGCCATTTGTTACTCAAGCAATAAACGCAGCTCGTGTAGCACACACCCTTTATCAAAATGGAGATGGTTTTGGAATCCAAGATAAAGATATCAAAAAACATATCTTGTCACTAGTTGTTGAACCCCTTTAA 1680 0.375 MSQSNFNLSSQILSRRSAHYKPNIWKYQFLQSLGSKYHKDEFVAVLNKRMMEVKSVFVQEKDIFKKLELVDWIQKLGLANHFQKEINGFLESLAVHVKTSTFNLSSEHLHLSALSFRLLRNHGYAVLPDILSKFLDKKGDVMRTISPHVGDVKDVVELLEASHLGLEGEKIMDEAKICATNSLNSIKKDQLSNNVDVERMVHSLELPSHWRVQWFEVKWHIKQYNKEKNMDPILLEMSKLNFNMIQATLQLELKELSRWWENLSIKEELSFARNRLVESFMCAAGVAFEPKYKSIRKWLTKVIVLVLVIDDVYDIHASFEELKPFTMAFERWDDTELEELPTYMRTCIHALQDVTNEIAYEVGGEHNFHLVLTYLKKTWIEFCKALYKEAKWYNMGYIPSLQEYLSNAWISSSGPVILLHSYLGTMYQVKDSMDHFLQTYEDLVYNVSLVIRLCNDLGTSVAERERGDAASSIVCYMNEKGVSEVKARKHIQDKILEAWKKINKKCFASSSSSCCVEPFVTQAINAARVAHTLYQNGDGFGIQDKDIKKHILSLVVEPL* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0141 559 SFLD Terpene Cyclase Like 1 C Terminal Domain 232 558 IPR034741 -
Pvu11g0141 559 Gene3D - 61 230 IPR036965 GO:0010333|GO:0016829
Pvu11g0141 559 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 21 229 IPR008930 -
Pvu11g0141 559 SFLD Isoprenoid Synthase Type I 232 558 - -
Pvu11g0141 559 PANTHER ALPHA-FARNESENE SYNTHASE 14 559 - -
Pvu11g0141 559 Gene3D Farnesyl Diphosphate Synthase 22 549 IPR008949 -
Pvu11g0141 559 SUPERFAMILY Terpenoid synthases 230 559 IPR008949 -
Pvu11g0141 559 Pfam Terpene synthase, N-terminal domain 24 201 IPR001906 GO:0010333|GO:0016829
Pvu11g0141 559 PANTHER OS04G0344100 PROTEIN-RELATED 14 559 - -
Pvu11g0141 559 CDD Terpene_cyclase_plant_C1 15 558 IPR044814 GO:0010333|GO:0016102
Pvu11g0141 559 Pfam Terpene synthase family, metal binding domain 235 501 IPR005630 GO:0000287|GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0141 Pvu-Chr11 1032830 1037034 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0141 K14173 - gmx:100812119 801.971