Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0134 ATGGAGGAAGTTCAAGAGTCCAAAACCCAACCATCGCCTGGTCAAGACGATGAAAATGAAGTGATTACTGAAAGTTCATCATTTGTTAAAGGGGAACCAGCCCCAGAGTTCAGTAGTAGCCCCCCAAAAGTTGACTCTGAAGTTGAGGTCCTTCATGAGAAGGTCGCCAAACAAATCATTAAGGAAGGCCATGGCCAGAAGCCTTCCAAATATTCAACTTGTTTCTTCCATTACAGGGCTTGGTCTGAGAAAACACAGCACAAGTTTGAAGACACATGGCTGGAGCAAAGGCCAATTGAGATGGTCTTGGGTAAAGAAAAGAAAGAAATGACTGGGTTGGGCATTGGTGTGGCAAGCATGAAAGCTGGGGAGCGTGCATTGGTGCGTGTAGGCTGGGAGTTAGGATATGGAGAGGAAGGAAGCTTTTCTTTTCCAAACGTTCCACCCATGGCAGATTTAGTTTATGAAGTTGAGCTCATTGGCTTTGATGAAACGAAAGAAGGGAAAGCTCGCAGTGATATGACCGTGGAAGAAAGAATTGGTGCAGCAGACAGGAGAAAGATGGATGGAAATGCTTTGTATCAGGATGAAAAACTAGAGGAGGCTATGCAACAGTATGAAATGGCCATAGCGTATATGGGAGATGACTTCATGTTCCAGTTGTTTGGGAAATACAGAGATATGGCTCTGGCTGTAAAGAATCCATGCCATCTTAACATTGCAGCTTGTTTGATTAAGCTGAACCGTTATGAAGAAGCTATAGGACACTGCAGCATCGTACTGGGTGAGGATGAGAACAATGTGAAGGCATTATTTAGGCGAGGTAAGGCTAGAGCAACACTTGGGCAAACAGATGCTGCCAGGGAAGATTTTCTAAAGGCAAGGAAACATGCCCCTCAAGATAAAGCAATTGCAAGAGAATTAAAATTGCTTGCTGAACACGACAAGGCCGTTTACCAAAAGCAGAAAGAGATATATAAAGGAATATTTGGACCAAGACCTGAACCAGTTCCTAAGTCAAGAAACTGGCTCATACTTATTTGGCAGTGGTTGCTTTCAGTATTCAATGGCCTTGTCAGCCTCTTCAAGCGTGAAAGGCTTAAATCTGACTAA 1113 0.4376 MEEVQESKTQPSPGQDDENEVITESSSFVKGEPAPEFSSSPPKVDSEVEVLHEKVAKQIIKEGHGQKPSKYSTCFFHYRAWSEKTQHKFEDTWLEQRPIEMVLGKEKKEMTGLGIGVASMKAGERALVRVGWELGYGEEGSFSFPNVPPMADLVYEVELIGFDETKEGKARSDMTVEERIGAADRRKMDGNALYQDEKLEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCHLNIAACLIKLNRYEEAIGHCSIVLGEDENNVKALFRRGKARATLGQTDAAREDFLKARKHAPQDKAIARELKLLAEHDKAVYQKQKEIYKGIFGPRPEPVPKSRNWLILIWQWLLSVFNGLVSLFKRERLKSD* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0134 370 SMART tpr_5 234 267 IPR019734 GO:0005515
Pvu11g0134 370 SMART tpr_5 183 216 IPR019734 GO:0005515
Pvu11g0134 370 SMART tpr_5 268 301 IPR019734 GO:0005515
Pvu11g0134 370 Gene3D - 39 164 IPR046357 GO:0003755
Pvu11g0134 370 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 71 163 IPR001179 GO:0003755
Pvu11g0134 370 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 32 331 - -
Pvu11g0134 370 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP42-RELATED 32 331 - -
Pvu11g0134 370 SUPERFAMILY TPR-like 175 326 IPR011990 GO:0005515
Pvu11g0134 370 Pfam Tetratricopeptide repeat 269 294 IPR019734 GO:0005515
Pvu11g0134 370 SUPERFAMILY FKBP-like 45 169 - -
Pvu11g0134 370 ProSiteProfiles TPR repeat profile. 268 301 IPR019734 GO:0005515
Pvu11g0134 370 MobiDBLite consensus disorder prediction 1 46 - -
Pvu11g0134 370 MobiDBLite consensus disorder prediction 7 26 - -
Pvu11g0134 370 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 67 160 IPR001179 GO:0003755
Pvu11g0134 370 Gene3D Tetratricopeptide repeat domain 165 296 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0134 54 330 Calmodulin-binding Proteins AT3G25230 32.404 8.41e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0134 - - gmx:100790587 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0134 11 990019 993591 Pvu11g0134 11 990019 993591 ECH