Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0122 ATGGCAAATGCTTTGAGAATTGGTTCTGTTATCTCACTCTGCTCCTTACGAAACACCACACCCCATCTTCCCCTTCTCTCCAACGCCACTCGCTTCCCTCCCAAGTTCCCCTTTTTCACCCTCTTCTCGTCGCCAAACTCATTTGGGTCTCCTTCATTTCGCACACTCTCTTCTTCTTCTTCTTCCATTGATGAGGCAGTAACAACCACCGAAGCCGTCACAGGGAATGCAAGTGGTGAAGCTGAGAGCAGTATCAAGGACGCCGCTGGCCTCCTTGACATAAGGGTTGGACGCATTCTGAGGGCATGGAAACACGATGAGGCTGATTCTCTGTATGTTGAAGAGGTTGATATCGGTGAGCCTGAACCCAGAATCATATGCAGTGGTCTTGTCAAATACATCCCTATTGAACACCTTCAGGGAAAAAAGGTTATTGTCCTTTCCAACCTGAAGCCAAGAAATATGCGTGGTGTGAAGTCCTGTGGAATGCTGATGGCGGCTTCTGATGCAAAGCATGAGAATGTTGAACTTCTGTTCCCTCCTGATGAAGCAACTCCTGGTGAAAGAATATGGTTTGGATCGGAAGATGAAAAAGATAATCAACCCGCCGCCGCCACTCCTAATCAGCTACAAAAGAAAAAGATATGGGAATTGGTGCAACCTCATCTTAAGACAGATGTTTCTTGCATTGCAATGCTAGGGGAGCATGTCATGCATACATCTGCTGGTTCAGTAGCATGCCAATCCTTGCAGAATGCAAATATCTCATGA 771 0.4669 MANALRIGSVISLCSLRNTTPHLPLLSNATRFPPKFPFFTLFSSPNSFGSPSFRTLSSSSSSIDEAVTTTEAVTGNASGEAESSIKDAAGLLDIRVGRILRAWKHDEADSLYVEEVDIGEPEPRIICSGLVKYIPIEHLQGKKVIVLSNLKPRNMRGVKSCGMLMAASDAKHENVELLFPPDEATPGERIWFGSEDEKDNQPAAATPNQLQKKKIWELVQPHLKTDVSCIAMLGEHVMHTSAGSVACQSLQNANIS* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0122 256 CDD tRNA_bind_EMAP-II_like 91 191 - -
Pvu11g0122 256 PANTHER TYROSINE--TRNA LIGASE, CYTOPLASMIC 74 256 - -
Pvu11g0122 256 PANTHER TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER 74 256 - -
Pvu11g0122 256 Pfam Putative tRNA binding domain 94 189 IPR002547 GO:0000049
Pvu11g0122 256 Gene3D - 88 256 IPR012340 -
Pvu11g0122 256 SUPERFAMILY Nucleic acid-binding proteins 88 255 IPR012340 -
Pvu11g0122 256 ProSiteProfiles tRNA-binding domain profile. 88 191 IPR002547 GO:0000049
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0122 Pvu-Chr11 906333 909152 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0122 - - var:108338794 444.891