Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0110 ATGGAGCCTTTGCTGCAATTCGCACCGATGCAGAGCTCCGTCGACGAGGGTTTTTGGCACCGATTGTCTTCTTTGAAGCTTAACAAGCTTGGCATAGACGATTCTCCAATTCATATATTCGGCTTTTATGCACCTTGCTCTCACACTCAAGTATCAAATCCTTTAACTCTTTTATCTGAGTCTTTACCTTCTGAATTGAGCGAGGCATCGTTAATTCCTGAACCGAGCCGCGGCAATCGGAACAAGTGCTCTGTTCCGGGGATGCTTTACAATACAAATACTGTGGAGAGCTTCCATGCACTTGATAAGCATGAGCTCTTGAAGAAAGAGGCAGCAAAGATATGGGATGATATCCTAACTGGAAAAGCTGTGGAGGACTGTTCCGTACTTGGGAGATTCCTGGTTATTTCTTTTGCTGACCTGAAAAAGTGGACTTTCAACTACTGGTTTGCTTTCCCTGCTCTCATGCTTGATCCTCCTGCAACTGTGGTTAATCTGAAGCCAGCTTCTCAGTGGTTCAGCATAGCTGAGGCTGAATCTCTCTCTGCGGCCTGTAACGAGTGGCGAAGCTCAAAATCAACATCAGATGTTCCATTCTTTTTAGTCACCATAGATCAAAAGTCATGTGCTACTGTCAGGCTTCTGAAGGACTGGGAAGCTTGTCAAGGCAATGCTAACAAGATCCTTTTTGGATTTTATGATCCATGTCATCTCCCAAATAATCCTGGATGGCCTCTCCGCAACTTCTTAGCACTTATTTCTGTGAGGTGGAATATCAACTCAGTTCAATTTTTCTGCTACAGAGAGAACCGTGGTTTTGCAGATATGAAGTTGTCTCTCGTTGGTGAAGCATTGATAACAGTTCCACAAGGGTGGAAAGACACGGTGCCTAGTGCAGTTGGATGGGAACTTAATAAGGGTAGAAAATCTTCTAGGTGTATAAGTCTTGCACAGTCCATGGATCCAACCAGATTGGCCATATCTGCTGCAGATTTGAATTTAAAGCTCATGAGGTGGCGTGCTTTGCCTTCTCTAGACTTGAATGCCTTATCTTCCATGAAGTGTCTTCTCCTTGGAGCTGGCACACTTGGATGCCAGGTCGCACGCATGCTTATGGCATGGGGTGTTCGAAAAATCACTTTAGTTGACAATGGCAGGGTGGCTATGTCTAACCCATTGAGGCAGTCTCTTTATACTTTGGACGACTGTCTTAATGGTGGCGAATTTAAAGCAACAGCTGCTGTGGAAAGTCTCAAACGGATTTTTCCAGCTGTGGATGCAGAAGGAATTGTTATGGCTATACCAATGCCTGGACATCCCATACACAGTCAGGAACACGATAGTGTACTTGAAGATTGTAAAAGGTTGCGAGATTTAATCGAGGCTCACGATTCAGTTTTTTTGTTGACTGATACCAGGGAAAGTCGATGGCTCCCAACACTTCTTTGTGCCAATACTAACAAGATTACCATTACTGCTGCACTAGGGTTTGATAGTTTCTTGGTTATGCGCCATGGAGCTGGTCCTTTAAGTCCTGCCCACAACTTCAATGCTGAAATTGTTAATTCTTCTTGTGTTGATAAGCCAGTAAATGATGCAAATGGAAAGCATAGATTGGGCTGTTATTTCTGCAGTGATGTTGTTGCACCAACCGATTCAACATCCAACCGCACTTTGGACCAACAATGTACGGTGACCCGACCAGGGCTGGCTCCTATTGCGTCGGCCCTTGCAGCCGAACTTCTGATCGGAATTTTGCATCATCCTCAAGGGATATTTGCAGTAGGGGACATTAACAATGCCGTCGACCGAGCTACCGAGCAACCTCTCGGAATTTTACCTCATCAGATTCGCGGCTCCCTTTCTCAGTTTTCTCAAATGACCCTTATCGGTTACTCCTCCTCCAGCTGCACTGCCTGTAGTCATACAGTTGTATCAGAATATCGAAACAAAGGAATGGAGTTCATACTTCAAGCAATTAATCATCCTACTTACCTAGAGGATCTCACTGGGCTCACAGAGTTGATGAAATCAGCCACCTCGTTGTCATTGGATTGGGACAGGGAGATGGAAGATGAGGATGACGACTGTGTTGAAATTTAA 2103 0.4484 MEPLLQFAPMQSSVDEGFWHRLSSLKLNKLGIDDSPIHIFGFYAPCSHTQVSNPLTLLSESLPSELSEASLIPEPSRGNRNKCSVPGMLYNTNTVESFHALDKHELLKKEAAKIWDDILTGKAVEDCSVLGRFLVISFADLKKWTFNYWFAFPALMLDPPATVVNLKPASQWFSIAEAESLSAACNEWRSSKSTSDVPFFLVTIDQKSCATVRLLKDWEACQGNANKILFGFYDPCHLPNNPGWPLRNFLALISVRWNINSVQFFCYRENRGFADMKLSLVGEALITVPQGWKDTVPSAVGWELNKGRKSSRCISLAQSMDPTRLAISAADLNLKLMRWRALPSLDLNALSSMKCLLLGAGTLGCQVARMLMAWGVRKITLVDNGRVAMSNPLRQSLYTLDDCLNGGEFKATAAVESLKRIFPAVDAEGIVMAIPMPGHPIHSQEHDSVLEDCKRLRDLIEAHDSVFLLTDTRESRWLPTLLCANTNKITITAALGFDSFLVMRHGAGPLSPAHNFNAEIVNSSCVDKPVNDANGKHRLGCYFCSDVVAPTDSTSNRTLDQQCTVTRPGLAPIASALAAELLIGILHHPQGIFAVGDINNAVDRATEQPLGILPHQIRGSLSQFSQMTLIGYSSSSCTACSHTVVSEYRNKGMEFILQAINHPTYLEDLTGLTELMKSATSLSLDWDREMEDEDDDCVEI* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0110 700 Coils Coil 700 700 - -
Pvu11g0110 700 Gene3D - 10 316 IPR042522 -
Pvu11g0110 700 CDD Apg7 354 672 - -
Pvu11g0110 700 Pfam Ubiquitin-like modifier-activating enzyme ATG7 N-terminus 5 320 IPR032197 -
Pvu11g0110 700 TIGRFAM E1_like_apg7: E1-like protein-activating enzyme Gsa7p/Apg7p 7 694 IPR006285 GO:0005737
Pvu11g0110 700 Pfam ThiF family 334 589 IPR000594 -
Pvu11g0110 700 Gene3D - 5 288 IPR042523 -
Pvu11g0110 700 PANTHER UBIQUITIN-LIKE MODIFIER-ACTIVATING ENZYME ATG7 5 691 - -
Pvu11g0110 700 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 346 667 IPR035985 GO:0008641
Pvu11g0110 700 Gene3D - 320 698 - -
Pvu11g0110 700 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 5 691 IPR045886 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0110 K08337 - gmx:100781725 1229.93