Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0109 ATGGGCAAACCAAGCACCCCCAGTGTCCTTCTTCTATCCCTTCTCACTCTTTCACTCTTTGTGGCTGAAACCTCTGCAAATAGGCAACTTCAAGCTCTTAACAAACTGCAAAAGTCCAAGTTTTTGAGAGAAAATTCAGAAAGTGGTAGGAGTGAGTTTGAGGTTGAGGAGGTTGTTGTTGATGGCATTGTTGATTCTCAAGAGGGTCTGAAAGAGAAAGATAGAATTGGAAGGCTTCCAGGGCAACCCCAAGTGAGTTTTTCTCAGTATGGAGGGTATGTGACTGTGGATAAAAGTGCTGGTCGTGCCTTCTATTATTACTTTGTTGAAGCTCAACGTTCTAAACATACACTCCCTCTTCTTCTTTGGCTCAATGGAGGTCCTGGATGTTCATCTCTTGCCTATGGAGCAATGCAGGAACTTGGACCCTTTAGAGTAAACAGTGATGGCAAAACACTACACACAAATGTGTTTTCATGGAACAGAGTTGCCAATGTTTTGTTCCTGGAGTCACCTACTGGAGTAGGGTTTTCCTATTCAAACAAATCAACAGATTATGACACCAATGGAGATAGGAAAACAGCTGCAGATAATTATTTGTTCTTGGTGAATTGGTTGGAGAGATTTCCAGAGTATAAAAACAGAGATTTCTTCATTGCTGGAGAGAGCTATGCTGGCCATTATGTGCCTCAACTTGCACATACCATTCTTTATCATAACAAAAGACCAAATAAAGCAATCATCAACTTCAAAGGAATCTTGATTGGGAATGCAGTGATAAACCAAGAAACTGACTCTCAAGGACTGTATGATTATCTTGCTACCCATGCAATCATCTCAGATAAAGCAGCTTTTGTCAATAATGCTTGCGAGTCCTCACCAAAGATTCAGAAAAGTGAGTGCGAAGCAGCAGAAGAAGAAGTTGAGAATAATATTGAATACATTGATTTATACAATATTTATGCTCCAATCTGCAATAGTACCGAACTCACACCCCGCCCAAAACAATATTCTATTGTGACTGATCCATGTAGCGAATATTATGTGCAAGCATATATGAATAGAAAAGATGTTCAAGAGGCTCTCCATGCCAATGTCACCAATCTCAAATATGACTGGGAACCCTGCAGCGACGTCATTACTAAGTGGGTAGATGGTGCTTCCACAGTTCTTCCAATTTTACACGAACTACTCAACAATAGCCTCAGGGTTTGGATTTTCAGTGGTGACACAGATGGAAGGGTTCCCATCACTTCAACCAAGTATTCCATTAAGAAGATGGAGCTTCCCGTTAAAACTGTTTGGCACCCTTGGTTTTCTCATGGAGAGGTTGGTGGCTATGCAGAAGTATACAAGGGAGGCTTAACATTAGCCACAGTGAGGGAAGCAGGGCATCAAGTGCCAAGTTACCAACCCGCAAGGGCCCTAACTTTGATCAAATATTTCTTAGACGGCACTCCTCTTCCAGGTCCTCCCAAAAGAAAGGCCTAG 1491 0.4192 MGKPSTPSVLLLSLLTLSLFVAETSANRQLQALNKLQKSKFLRENSESGRSEFEVEEVVVDGIVDSQEGLKEKDRIGRLPGQPQVSFSQYGGYVTVDKSAGRAFYYYFVEAQRSKHTLPLLLWLNGGPGCSSLAYGAMQELGPFRVNSDGKTLHTNVFSWNRVANVLFLESPTGVGFSYSNKSTDYDTNGDRKTAADNYLFLVNWLERFPEYKNRDFFIAGESYAGHYVPQLAHTILYHNKRPNKAIINFKGILIGNAVINQETDSQGLYDYLATHAIISDKAAFVNNACESSPKIQKSECEAAEEEVENNIEYIDLYNIYAPICNSTELTPRPKQYSIVTDPCSEYYVQAYMNRKDVQEALHANVTNLKYDWEPCSDVITKWVDGASTVLPILHELLNNSLRVWIFSGDTDGRVPITSTKYSIKKMELPVKTVWHPWFSHGEVGGYAEVYKGGLTLATVREAGHQVPSYQPARALTLIKYFLDGTPLPGPPKRKA* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0109 496 Gene3D alpha/beta hydrolase 70 327 IPR029058 -
Pvu11g0109 496 SUPERFAMILY alpha/beta-Hydrolases 69 490 IPR029058 -
Pvu11g0109 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 10 488 IPR001563 GO:0004185|GO:0006508
Pvu11g0109 496 Gene3D - 390 485 - -
Pvu11g0109 496 Gene3D - 344 381 - -
Pvu11g0109 496 PANTHER CARBOXYPEPTIDASE 10 488 - -
Pvu11g0109 496 Pfam Serine carboxypeptidase 80 484 IPR001563 GO:0004185|GO:0006508
Pvu11g0109 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 156 168 IPR001563 GO:0004185|GO:0006508
Pvu11g0109 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 169 179 IPR001563 GO:0004185|GO:0006508
Pvu11g0109 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 205 230 IPR001563 GO:0004185|GO:0006508
Pvu11g0109 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Pvu11g0109 496 ProSitePatterns Serine carboxypeptidases, serine active site. 219 226 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0109 Pvu-Chr11 809821 816500 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0109 352 488 Calmodulin-binding Proteins AT2G22960 28.467 1.37e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0109 K16297 - gmx:100783864 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0109 11 809821 816500 Pvu11g0109 11 809821 816500 ECH