Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0102 ATGGGATTTGATAATGAGTGCATAGTGAACATTCAATCTCTTGCTGGAGAGTACTTCTGTCCTGTGTGTCGGTTGCTTGTATTTCCAAATGAAGCTTTGCAGTCACAATGTACTCATTTATACTGCAAGCCGTGTTTGACATACACTGTGAGCACTACAAAGGCTTGCCCATATGATGGTTACTTGGTCACTGAGGCAGATTCCAAGCCTCTGACAGAGTCAAATAAGACACTTGCTGAAACTATTGGAAAAATAGCAGTTCACTGCCTTTATCATAGAAGTGGGTGCACATGGCAAGGAACTTTGTCTGAGTGCACATCTCATTGTTCTGGATGTGCTTTTGGAAATTCTCCCGTAGTTTGCAATAGGTGTGGGATACAAATAGTGCATCGCCAAGTACAAGAACATGCACAAAACTGCCCTGGTGTGCAAGGTCAGGCACAACAGGTGACCACTACCCAGGATCCTTCAACTACTAGTGTTGCTGCTTCTACGGATCAGAACCAGAATGCTACCCCTGTTGCAGCAACCGCTGCACAAGCTGTCACAACTGCCATGCCTGGGCAGGTTTCAAATCACCAACCCAATCTTACGTCTCAAACACAAGCTTTAGTTCAAACTACTGGGCAGCCAGCGGCGGAGCAGTGGTATCAGCAGCAACAGTATCAACAATACTACCAGCAATACCCTGGACAAGATCCATACCAACAGCAGTATCAACATTACTATCCCTATCAACAGTCCATGGTTCCACAGTACCAGCAGGCCTATGGTCAGCCCCAACCTCAGTCTCAATCACAGCCTCAGGCCCAGCTTCAACCTCAGCCCCAGCCACAGGCCCAACACCAATCACAGCAGCCTCAACTTCAATCACAGCCTCAGGCTCAAGGACTTCCTCATCCACCTTCACATATTCAGGCTCCGGTGGTCCCACCAGCTCAGAATCAGATGCAAGTTCAACAACAACCTCAGCAACTTCAACCTGCTGTGCAGCCACATGGACAGACGAGTCATGCACCTGGTCATGCCCTCCCTCAATCTCAGACTCAGCCCTATCCATACCCACAAGTTCAGCCTCATTCTGTCCAACCTCAACCCCAACAGCCTATGCAAATTCCTCCATATCAGCAACCTCCTCCTCAAATGCAGCATTCACAACCTCAAATTCAGCAACCAGTTCAGAAGTATCCTGTTCCTCAATCTCAAGTTCATGCACAACTGCAACCTAATGCTCCAGTTCAACATCCCTCTCAGCTCCCAATGCCTCCTCACCATCCTGTGACACCTAATGTCCAGCCTCAAGTGCAAAATGCAACGACACATTCAGTGACAGGGCATCACTCTTATCCACAACCTCTGCCTCACCCAAATATGCAAACGGGGGTTCCTCAACATCCTATGCACATGCATCCTCAAAATGGGCCCCAACCCCAGGCTCAACACTCTGTCCAGATGCAAAATCAATTTCCTCCTCAAATTCCAACCATGCGTCCAAATCAATCTCATGCTATATTTCCTAACCAGCAATCATCTGTTCAGGGCCAAACAACCCCTCCTTTGCAACAACAGCCTGTGTATTCCCATAATCAACAACCTGGACAAATAAACCAACGTCCTACTATGCAACCAGTTCAACAAATACCTCAGCAGCAGCCATTTGCACAGCACCAAATGTCTATGCCATCTCATTTACGACCACTGGGTCCAGCACATTCATTTCCCAAACATGTGTATTCACAGTCACAGGGTAATATTGCACCATCAAATAACATTCAGCACAGTCAATCTCAAAATGCTGGAGGAAGGCCTTTAGTTCCTAACCATGCAGGCCATCTACAGCCATTTGCGCAATCTGCCAATACTATTCCAGTTAGACATGGGCAAAATGGTGCTGGCTACTTGCATGAAAATCAGAAATCGTTGGCTGGTACCAATAATCCAGTACAGTTGCCTTCTGAATTGCAGTCTAGGGCACCAGAAACAATAGAAAGACACGGTGATGTTGGCGAACAACAAACTGAGTCTGCTGCGGGTAAACTCGGTAAAAATTTGGACATAGTGTCTGGATCAGCAAATGAGTTGAAATCTGAAAAATTCGAAGCCAGCTTGAAACCAATTGAGGTTGGGAATATGCAAAATAATGAAGATCCACACTCCATTAAGACTTCTGTCCCAAATGCCAATGCAGTAGAAAATGCTGATTCTGTGAATAAGAATCTAGGGATGGGGGCGGCTGCTGAAAGCAATTGGAAGCCTGCGGTTAGTAATAAATCTGGTGGTGCAATGCACGGGGTTCAAAATGACAGTAATGAGCATTCTGTCCAAGGCAATGAATTTCAAGAAGGACATCCACCAAACACAGAGACAAAACTCCCTGAGTCAGAAACTGATAAATTACACAATGATGACAATCCTACCGTATCTAACTCTCAAAGCAATGGGAGTTTTGCTCAGTTGTCTCATTCAGCCACTTTCACGGATCAGAGTAAGCATCATCAACCAATGACTAATTATGCGCCTTCCGTTCAGCAGAGATCTTCTGCAATGTTAGCATCACAATCGCCACACCTGACAATTCCAAACCAGCCACTCTCTTCATTGCACTCTTCAGCCCTTGTCAGGAATCATGGATCTGCCCATGATCCTCATACAGGACACGCCTCAGCAGAGAATTTTCCGCCAACCATGTTTAAGCAGCCACAAGATTCTGACATTACTCTCGGACGAGGCTTTCAACCTCAGTCTCTTGGACCCCCGCAACCATTTAACCAAGTCCACGAGCCTCCTTTCCGTGCTGGAACATCAAATTTTTCTCGTCTTGGAGGGCCTCAATTTGGTGCACCACTTCCTGGAGATATGCATGGTCGAATGGCAGCCAACTTACCACCACATGGTACTGAAGGTTTGGGTTTGCATGATGAAAGGTTCAAACCTTTCCTTGTTTCAAATCAGCAAACTATGGATAGAAGAGAGTATGACGATGATCTTAAGAAATTCTCTAGGCTGCCTATGGATGCTGAGTCAATTTCTAAATATGGAAATTATTCATTAAGTGCACATGAATCTGGAAAGAGATCAGTTGGTATTCATGACGATGTCATTAAGAAATCAGGTTCGGCACTTCATCCTGGTTATCTTGGACCAGGTCCTGGATATGGGAGACATCATATGGATGGCATGACTCCTAGAAGTCCTGTTGGTGAATATGCTGAGATGTCTTCCAGGAGATTGGGGCCCCACTCTGGTAGTCTTATTGGTAAGTCAGGTATAGATGATTTTGATGGCAGAGTTCCTCGTCATTTTGGTGGTGAGTTCCGTGATAGTCGGTTTCCTCATTTGCCTAGCCATTTGCATAGAGATGAATTTGATGGTTTTGGTAACTTCCGAATTGGTGAACACCCAAGGAGTGGTGATTTCATTGGTCAAGATGAATATGCTGGCCATTTCCGAAGGGGTGAACCTTTGGGTCCTCATAATTTTCCTAGACATTTGCAGCTTGGGGAGCCTGTTGGTTTTGGTGCCCATCCTGGTCATATGAGAGCAGTTGAACATGGCAGTTTTCGTAGTTTTGAATCATTTGCAAAAGGCAGCCGGCCAGGTCATCCGCAACTTGGTGAGCCTGGGTTCAGGAGCAGCTTTTCTCTTCCTGGATTTCCCAATGATGCTGGATTTTTAACAGGAGATATCAGGTCGTTTGATAATTTGAGGAGAAGGAAGGTTTCCAGCATGGGGTGGTGCCGGATATGTAAAGCTGACTGTGAAACCGTTGAAGGTCTGGACTTGCATTCACAAACAAAGGAGCACCAGAAGATGGCTATGGACATGGTCAAGACAATCAAACAAAATGCGAAGAAACAGAAGTTAATACCCAGTGAACAACCCACAGTTGATGAGGGAAACAAGACACACAATACTGGTTTTGAGGGTCGTGGAAATAAGCATTGA 3945 0.4575 MGFDNECIVNIQSLAGEYFCPVCRLLVFPNEALQSQCTHLYCKPCLTYTVSTTKACPYDGYLVTEADSKPLTESNKTLAETIGKIAVHCLYHRSGCTWQGTLSECTSHCSGCAFGNSPVVCNRCGIQIVHRQVQEHAQNCPGVQGQAQQVTTTQDPSTTSVAASTDQNQNATPVAATAAQAVTTAMPGQVSNHQPNLTSQTQALVQTTGQPAAEQWYQQQQYQQYYQQYPGQDPYQQQYQHYYPYQQSMVPQYQQAYGQPQPQSQSQPQAQLQPQPQPQAQHQSQQPQLQSQPQAQGLPHPPSHIQAPVVPPAQNQMQVQQQPQQLQPAVQPHGQTSHAPGHALPQSQTQPYPYPQVQPHSVQPQPQQPMQIPPYQQPPPQMQHSQPQIQQPVQKYPVPQSQVHAQLQPNAPVQHPSQLPMPPHHPVTPNVQPQVQNATTHSVTGHHSYPQPLPHPNMQTGVPQHPMHMHPQNGPQPQAQHSVQMQNQFPPQIPTMRPNQSHAIFPNQQSSVQGQTTPPLQQQPVYSHNQQPGQINQRPTMQPVQQIPQQQPFAQHQMSMPSHLRPLGPAHSFPKHVYSQSQGNIAPSNNIQHSQSQNAGGRPLVPNHAGHLQPFAQSANTIPVRHGQNGAGYLHENQKSLAGTNNPVQLPSELQSRAPETIERHGDVGEQQTESAAGKLGKNLDIVSGSANELKSEKFEASLKPIEVGNMQNNEDPHSIKTSVPNANAVENADSVNKNLGMGAAAESNWKPAVSNKSGGAMHGVQNDSNEHSVQGNEFQEGHPPNTETKLPESETDKLHNDDNPTVSNSQSNGSFAQLSHSATFTDQSKHHQPMTNYAPSVQQRSSAMLASQSPHLTIPNQPLSSLHSSALVRNHGSAHDPHTGHASAENFPPTMFKQPQDSDITLGRGFQPQSLGPPQPFNQVHEPPFRAGTSNFSRLGGPQFGAPLPGDMHGRMAANLPPHGTEGLGLHDERFKPFLVSNQQTMDRREYDDDLKKFSRLPMDAESISKYGNYSLSAHESGKRSVGIHDDVIKKSGSALHPGYLGPGPGYGRHHMDGMTPRSPVGEYAEMSSRRLGPHSGSLIGKSGIDDFDGRVPRHFGGEFRDSRFPHLPSHLHRDEFDGFGNFRIGEHPRSGDFIGQDEYAGHFRRGEPLGPHNFPRHLQLGEPVGFGAHPGHMRAVEHGSFRSFESFAKGSRPGHPQLGEPGFRSSFSLPGFPNDAGFLTGDIRSFDNLRRRKVSSMGWCRICKADCETVEGLDLHSQTKEHQKMAMDMVKTIKQNAKKQKLIPSEQPTVDEGNKTHNTGFEGRGNKH* 1315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 1283 1314 - -
Pvu11g0102 1314 SUPERFAMILY TRAF domain-like 84 145 - -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 471 542 - -
Pvu11g0102 1314 ProSiteProfiles Zinc finger RING-type profile. 20 59 IPR001841 -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 415 429 - -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 876 895 - -
Pvu11g0102 1314 ProSitePatterns Zinc finger RING-type signature. 37 46 IPR017907 -
Pvu11g0102 1314 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 1A-LIKE 1 1313 - -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 788 802 - -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 1284 1302 - -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 254 299 - -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 382 414 - -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 430 447 - -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 309 356 - -
Pvu11g0102 1314 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 121 IPR013083 -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 751 787 - -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 577 610 - -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 908 928 - -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 254 542 - -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 751 815 - -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 357 381 - -
Pvu11g0102 1314 SUPERFAMILY RING/U-box 17 67 - -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 148 171 - -
Pvu11g0102 1314 MobiDBLite consensus disorder prediction 577 602 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0102 - - gsj:114380210 1863.58