Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0098 ATGAAGAGAGCCAAGAGTAGAAGAGTAAGGAGAAGGAACAGGATCAGTGTGCTTCTGCCGAGGAATTTGATCATTCAAATGTTGTTGAGGTTGCCGGTTAAGTCTCTTGCTCGTTTCAAAAGTGTCTGTAAATCATGGTTTTCTGTAATCTCTGATCCCCACTTTGCAATTTCACATTTTGAACTTGCTGCAGCATGCACGGAGAGACTTTTGTTCTTGGGACCTACTGTTCATGAAGTCCGATCCATAGACTTCAATGCACCCCTTAACGATGATTCTGCTTCGGCTGCATTAAACCTCAACTTTCTCCAAAGTCTGTGTTTGTGGAATCCCGCAACAGGTATCCACAAACAAGTGTGTGAGTCACCTATTGCATCGGATATGGATGCCAGGCTTTTCGTGTTTCTCTATGGTTTTGGTTATGACCCTTCAACAGATGACTACTTGGTGGTGCAAGCCTCCTACAACTTTGACTCAGAAGTTGCAACCCGAGTGGAGTTTTTCTCTTTCAGAGCTAATGCGTGGAAAGAAACTGAGGGCATTCATTTGTCTTGCATGAATTCCTGCGATGATATCAGAACGGGGTTGCTCTTGAACGGTGCTATTCATTGGTTGGCTTATCAAAGGAGTTTTTCAGATATACTTCTGCCTGATGATATGTGCGACGAGTATGATATATGCAATTTGGCAGTACTTGGAGACTTTCTTTGTGTTCATGTTTTTGGGTATGATGATTTTCCAGCAAAAATATGGGTGATGAAAGAGTACAAAATACAGTCATCTTGGACTAAGAGGGTTGATGTGCCTGTTGATGAGATCCCTACTAAATACTTTTCCCTGATTTGCTCTACAAAAAGTGGTGATATTGTAGGGAAAGATGGCAATAATGGATTGGTAAAATATAACAGCGAAGGACAGCTGCTAGAGCATCGATCCTATCGCAACGGTCGAGGTGACTCCCTCGTGGCTGTGTATACTGAGTCTCTCCTTTCACTCCCTTATGATGGTGATCAAGGGAAGAACACAACAATGGTGTACTCTGATAGCATATTACGAAGTGAACTTTAA 1068 0.4242 MKRAKSRRVRRRNRISVLLPRNLIIQMLLRLPVKSLARFKSVCKSWFSVISDPHFAISHFELAAACTERLLFLGPTVHEVRSIDFNAPLNDDSASAALNLNFLQSLCLWNPATGIHKQVCESPIASDMDARLFVFLYGFGYDPSTDDYLVVQASYNFDSEVATRVEFFSFRANAWKETEGIHLSCMNSCDDIRTGLLLNGAIHWLAYQRSFSDILLPDDMCDEYDICNLAVLGDFLCVHVFGYDDFPAKIWVMKEYKIQSSWTKRVDVPVDEIPTKYFSLICSTKSGDIVGKDGNNGLVKYNSEGQLLEHRSYRNGRGDSLVAVYTESLLSLPYDGDQGKNTTMVYSDSILRSEL* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0098 355 SUPERFAMILY Galactose oxidase, central domain 106 304 IPR011043 -
Pvu11g0098 355 PANTHER OS02G0783600 PROTEIN 104 332 - -
Pvu11g0098 355 PANTHER OS02G0783600 PROTEIN 17 91 - -
Pvu11g0098 355 SUPERFAMILY F-box domain 18 89 IPR036047 GO:0005515
Pvu11g0098 355 SMART fbox_2 19 59 IPR001810 GO:0005515
Pvu11g0098 355 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 104 332 - -
Pvu11g0098 355 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN 17 91 - -
Pvu11g0098 355 TIGRFAM F_box_assoc_1: F-box protein interaction domain 104 282 IPR017451 -
Pvu11g0098 355 Gene3D - 18 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0098 Pvu-Chr11 713553 714719 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0098 - - pvu:PHAVU_011G009500g 710.294