Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0096 ATGCATAAAAATCGCTTACAAGAGTTTGCTCAGAGGTATAACATTGCACTTCCCTTATATCAATCTAACAACGAGGGACAACAACATGCTCCAAGATTTAGGTCAAAGGTGTGGGTGGATGGAATGAGTTACATTTCCCAATCTACTTTTTCCCACAGGAAAACTGCTGAACAGGATGCTGCCAGACTTGCCTTGAAGTGCCTCTCTAAAAGGACAAGAGATGAAGCACCATCTCTTGATTGTGAGTTAAGTAGTACTATTGCTCCAACCCATCAATACAAAATGGTACTTGGTTTTTTAGGCCTATATAGAGAGGTCTTCTTCACTAGTTCTGACATGCTCATTATTGACCTTAACAAACCTTAG 366 0.4016 MHKNRLQEFAQRYNIALPLYQSNNEGQQHAPRFRSKVWVDGMSYISQSTFSHRKTAEQDAARLALKCLSKRTRDEAPSLDCELSSTIAPTHQYKMVLGFLGLYREVFFTSSDMLIIDLNKP* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0096 121 SMART DRBM_3 2 69 IPR014720 -
Pvu11g0096 121 PANTHER RIBONUCLEASE III 1 78 IPR011907 GO:0003723|GO:0004525|GO:0006364
Pvu11g0096 121 Pfam Double-stranded RNA binding motif 3 66 IPR014720 -
Pvu11g0096 121 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1 70 IPR014720 -
Pvu11g0096 121 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 4 1 78 - -
Pvu11g0096 121 SUPERFAMILY dsRNA-binding domain-like 3 72 - -
Pvu11g0096 121 Gene3D - 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0096 Pvu-Chr11 701196 702962 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0096 - - pvu:PHAVU_011G0093000 246.899