Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0090 ATGGGTGTTGTGGAGGGTCTCTTAGCTTTAGCTTTGGTTCTGAATGTGGTTGTGGTGAGTAATGGAGGCAAAAGCAGCCTCTTTATCAGGAAAACCAAGAAGACTGTGGATATGCCACTTGGAAGTGATGTGTTTTCTGTTCCTCGTGGTTATAATGCTCCTCAGCAGGTTCATATAACGCAAGGTGACCTTGTGGGGAGGGGAATGATCGTATCATGGGTGACTATGGATGAACCAGGGTCGAGTGCAGTGCGATATTGGAGAGGGAAAAATGGCAAGAAGAAGACTGCAGAAGGAAAAATGGTTACTTATAGGTTCTTCAATTACTCATCTGGGTTTATTCATCACGCCACCATCAGAAATTTGGAGTACAACACCAAATACTACTATGAAGTTGGACTTGGGAACACAACACGCCAGTTTTGGTTTGTAACTCCACCTGAAATTGGCCCTGATGTACCATATACATTTGGTCTCATTGGGGATCTTGGTCAGAGTTTTGATTCAAATATAACGCTTTCTCACTATGAATTGAGTCCAAAAAAAGGAGAAACAGTACTGTTTGTTGGAGACCTCTCTTATGCTGATAACTACCCGAATCATGATAATGTTAGGTGGGATACTTGGGGAAGGTTTACAGAAAGGAGTGTTGCATATCAACCATGGATATGGACTGCAGGGAACCATGAAATTGACTTTGCTCCAGAAATTGGTGAAACCGAACCTTTCAAGCCTTTTAGCCACCGTTACCATGTTCCTTACGAAGCATCTCAGAGCACTTCACCCTTCTGGTATTCTATCAAGAGAGCTTCAGCACACATCATTGTCTTGTCCTCATATTCAGCATATGGCAAATATACGCCACAATATACATGGCTAGAACAGGAGCTACCGAAAGTTAACAGGTCAGAGACTCCTTGGTTGATTGTTCTGATGCATTCACCTTGGTACAATAGCTACAACTATCACTACATGGAAGGGGAAACAATGAGAGTAATGTACGAAGCCTGGTTTGTGAAGTACAAGGTTGATGTTGTGTTTGCTGGTCATGTTCATGCCTATGAACGATCTGAACGTGTTTCCAACATTGCATACAACATTATAAATGGTCATTGCATTCCTGTAAAAGATCAATCAGCTCCTGTATACATCACCATTGGTGATGGAGGAAACCTTGAAGGTTTAGCAACCAACATGACACAACCACAACCAGCATATTCTGCATTCCGAGAGGCCAGTTTTGGACATGCCATATTTGACATAAGGAACAGAACTCATGCTCACTATAGCTGGAACAGAAATCAAGATGGTGCTGCAGTGGAGGCTGATTACATTTGGTTTTTCAACCGATTCTGGTACCCAGTTGATGATTCCACAGTTTATGTTTCACATTAA 1395 0.4222 MGVVEGLLALALVLNVVVVSNGGKSSLFIRKTKKTVDMPLGSDVFSVPRGYNAPQQVHITQGDLVGRGMIVSWVTMDEPGSSAVRYWRGKNGKKKTAEGKMVTYRFFNYSSGFIHHATIRNLEYNTKYYYEVGLGNTTRQFWFVTPPEIGPDVPYTFGLIGDLGQSFDSNITLSHYELSPKKGETVLFVGDLSYADNYPNHDNVRWDTWGRFTERSVAYQPWIWTAGNHEIDFAPEIGETEPFKPFSHRYHVPYEASQSTSPFWYSIKRASAHIIVLSSYSAYGKYTPQYTWLEQELPKVNRSETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEAWFVKYKVDVVFAGHVHAYERSERVSNIAYNIINGHCIPVKDQSAPVYITIGDGGNLEGLATNMTQPQPAYSAFREASFGHAIFDIRNRTHAHYSWNRNQDGAAVEADYIWFFNRFWYPVDDSTVYVSH* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0090 464 Gene3D - 53 149 - -
Pvu11g0090 464 Pfam Calcineurin-like phosphoesterase 156 354 IPR004843 GO:0016787
Pvu11g0090 464 PANTHER ACID PHOSPHATASE RELATED 8 460 IPR039331 GO:0003993
Pvu11g0090 464 Pfam Purple acid Phosphatase, N-terminal domain 54 145 IPR015914 GO:0003993|GO:0046872
Pvu11g0090 464 SUPERFAMILY Metallo-dependent phosphatases 151 458 IPR029052 -
Pvu11g0090 464 CDD MPP_PAPs 151 449 IPR041792 -
Pvu11g0090 464 PANTHER PURPLE ACID PHOSPHATASE 8 460 - -
Pvu11g0090 464 Pfam Iron/zinc purple acid phosphatase-like protein C 380 438 IPR025733 -
Pvu11g0090 464 Gene3D - 150 459 IPR029052 -
Pvu11g0090 464 SUPERFAMILY Purple acid phosphatase, N-terminal domain 36 147 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0090 Pvu-Chr11 637169 640503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0090 42 437 Miscellaneous Gene Families AT1G13900 24.891 1.25e-21 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0090 K22390 - gmx:100815854 852.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0090 11 637169 640503 Pvu11g0090 11 637169 640503 ECH