Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0088 ATGGGCGTGTCTTTGAACGAATCGATACAATTATGCATGTTTGATTTGAGAAGAGGCCAAAATGAGGGCCAAGAGCTTGATAAGATCCTCTTCTTCTTCCCCGCGGACTTGCCCTTCTCCAAGCAACTCTCCGTCATTGGCCTCAGCGAAGGACTCATCACCTTCACAAGAATCTTCTCTCCTGAGGCTGCTTGTGAGGTCATCGAAGCTGAGCGCCATTCTCATGTTTTCCACGAGGCCGAACCTGATATCTGGATGGTCATGTTGGTGGAGAAAAGCAATGACTCAGAGCCTATCTGGAGAGATGATGCATTAAGAAAAGTTCTCAAGGAAATTCCCTCACTTTTTGTTATGTTTCATGGATCTGTTAGAGCAATGCTGGAGAAAGAACCCGGTGGAGGACTAGCAAGACGACATTTATATTCCTTTATCATGGATTATTTGAGGGATTTTCTTGCGGGGAGAAAGCTTCTTTTACCATCCTTCCGTGATTGCCTTAAGGAACGTGGAACTGTGCAGATGCTGACAATTGGTCGGGAGGCTGCAATTGAGGTTCAGTCCCTTGTCAGGGTGCTTGAATCTTCTGCTGGGAACACTCTCTGCCACTCTTTGATTTTATTTCAAGACCTGCTAGTGTCCACAACTCTATCTCCTGATGACACTGTAAATTTATTCACATATGCGGTGCTAAGGTTGACTCCTCATGCTCTATCTTCTGGATCAAGTTCCTGGTCCTACTTAAGGAAAGGAAGTACTGCATCCAATGTTGCCACTGAGTTTAACATGGCCCATCCAAATTCTATGTCTGATAGTTTTTATGGCACATCTGATATATCCTCTGGTGAAGATAACCACTATCATGTTGTGAGGCCCCTACAGGGTGACAAATGGTCTAAAGGAAAAGATGGTTATCTTGTCACTGATTTATGGGGTGCAGAAATTGGTACGTGGGTGTTTGCCACTCCCACAGTTTGGCTTCAACAGACAGGAGAGAAAATGTATCTGTGTGTTTACCAGCATAGAAGCCTTACTTTGATGCTTATGATTCCTGTATCAGCTGTACCTAATGGGGAGCAAGGTGTGTCGGAAGTGAGGCAACAAATTATTGAAAATGCATCACTTAAGATATTGAAAGTCGAAGAGAAGCTATCCAAAGGATGGGGTGGTGAGAATGCATATCACGTTGGTGGGTACCGCTACTTACTAGTAGATGGTGATAGAAATATATCCAGGGCTTCTCCAGCAACAAAAGTAACAACTTTAACAAAGGAGTCCTTGCTTGCTATGAATAAGCTTAGGCAAGAGGTGGAGTTGGAAAAGAGTAGAGCGAAACTGGATGGGTGTAATTTTGAAAAAGATTTAGAGATGTGCATTAGAACAAAAAATAATGCATGGGTTATTTCTCGAGTCACAAGAGGGAAGGAGCTTCATATGGTTCTAGAGAAAGCTAATGAAACCCTTCTATATGCCTCAGATGCAATTCAGAAGTTTAGCGACAGGTATTGCGATGGAGCATTTTCACTGGACTAA 1530 0.4327 MGVSLNESIQLCMFDLRRGQNEGQELDKILFFFPADLPFSKQLSVIGLSEGLITFTRIFSPEAACEVIEAERHSHVFHEAEPDIWMVMLVEKSNDSEPIWRDDALRKVLKEIPSLFVMFHGSVRAMLEKEPGGGLARRHLYSFIMDYLRDFLAGRKLLLPSFRDCLKERGTVQMLTIGREAAIEVQSLVRVLESSAGNTLCHSLILFQDLLVSTTLSPDDTVNLFTYAVLRLTPHALSSGSSSWSYLRKGSTASNVATEFNMAHPNSMSDSFYGTSDISSGEDNHYHVVRPLQGDKWSKGKDGYLVTDLWGAEIGTWVFATPTVWLQQTGEKMYLCVYQHRSLTLMLMIPVSAVPNGEQGVSEVRQQIIENASLKILKVEEKLSKGWGGENAYHVGGYRYLLVDGDRNISRASPATKVTTLTKESLLAMNKLRQEVELEKSRAKLDGCNFEKDLEMCIRTKNNAWVISRVTRGKELHMVLEKANETLLYASDAIQKFSDRYCDGAFSLD* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0088 509 PANTHER VACUOLAR FUSION PROTEIN CCZ1 HOMOLOG B 4 509 - -
Pvu11g0088 509 PANTHER UNCHARACTERIZED 4 509 IPR013176 GO:0016192|GO:0035658
Pvu11g0088 509 Pfam First Longin domain of INTU, CCZ1 and HPS4 12 121 IPR043987 GO:0016192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0088 - - gmx:100792001 907.901