Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0077 ATGCCGTTTCGATCGGAGAACGATAACCCTAACCCTACCACTCCCACTCCGCCATTGAAGAAGCCATGGTCGGAGCTATGGACCAAATCCAAACCCATAAACCAAATGGTCATGGCAATGAAGCTTCACTCTCTCTCTCCTCGCCTCGCCGCCAAACACAACCCCACTCTCTCTCCTTTCCCCGCCGTCGCCGACCGAACTCTTCTCTTCTCCGACGAGATTCTCCTCAAAATCCTCGCACTCCTCTCCGACTCCCCTGCTCAGCGAAACTCCAATGCTCTGGTCTGCAAGCGCTGGCTCAATCTCCAAGGCCGTCTCATCCGCTCCCTCGCAATCTCCGACTGGAACTTCCTCCTCTCCGGTAGACTCATCCACCGCTTCCCCAACCTCAACCACGTCGATTTGCTCTCCGCCGCCTTCATTTTCCCTCGCAATTCCGCCGTTCTTCTCAGCCACCGCCTCCTCTCCGTGCACCTCCATTCCGACCTCTCCCCCAATTGGTGCTTCTGCGAGGAAAACATGCTCCCCGTCGAAGTCATCGACAACGGCCTCGCCACCCTCGCCGCCGGGTGCCCTAACTTGCGCCGCCTCCACGTCATCGGCGCCAGCGAAATGGGGCTGCTGAGCGTCGCGGAGGAGTGCCCCACTCTGCAGGAACTCGAACTGCAGTGCTGCAGCGACAACGTTTTGCGCGGGATCACGGCCTGTACGAATCTTCAGATTCTGAAACTCGTTGGGCATGTTGATGGGCTCTACAGTTCGGTGGTTTCTGATATTGGGTTGACGATTCTGGCTCAGGGGTGCAAGAGGCTGGTGAGGTTGGAGCTTTGTGGGTGCGAAGGGAGTTTTGATGGTGTTAAGGCCATTGGGAAGTGTTGTTTGATGTTGGAGGAGTTGACGTTTTCTGATCATAGGATGGATGGTGGTTGGCTTGCTGCTATCTCCTTTTGTGAAAATTTGAAGACTTTGAGGTTTCAGTCTTGTAAGAGGATTGATTCCAGTCCTGGGATGGAGGAGTATTTGGGTTCTTGCCCTGCTCTTGAACGGTTGCATTTGCAGAAATGTCAACTTCGGGATAAGAAGAGTGTTTCGGCTTTGTTTTCGGTGTGCAGGGCTGTCAGGGAGATTGTTCTTCAGGACTGTTGGGGATTGGATAATAGCATCTTCTGTTTTGCAATGATGTGCAGGCGGGTAAAGTTGTTTTATTTGGAAGGGTGTTCATTACTAACTACAGAAGGTTTGGAGTTAGTAGTTCATTCATGGAAGGAGCTTCAGAGCCTGAGAGTAGTGTCATGTAAGAACATAAAGGATTCTGAGATCTCTACTGCACTAGCAACCTTGTTTATCACTCTGAAAGAGTTGAGATGGAGCCCTGATACCAAATCACTTCTTTCATCCAGTGTTACAGGGATAACCATGGTGAAAAAAGGTGGTAAATTTTTCAAAAGGGCACGATAA 1458 0.5137 MPFRSENDNPNPTTPTPPLKKPWSELWTKSKPINQMVMAMKLHSLSPRLAAKHNPTLSPFPAVADRTLLFSDEILLKILALLSDSPAQRNSNALVCKRWLNLQGRLIRSLAISDWNFLLSGRLIHRFPNLNHVDLLSAAFIFPRNSAVLLSHRLLSVHLHSDLSPNWCFCEENMLPVEVIDNGLATLAAGCPNLRRLHVIGASEMGLLSVAEECPTLQELELQCCSDNVLRGITACTNLQILKLVGHVDGLYSSVVSDIGLTILAQGCKRLVRLELCGCEGSFDGVKAIGKCCLMLEELTFSDHRMDGGWLAAISFCENLKTLRFQSCKRIDSSPGMEEYLGSCPALERLHLQKCQLRDKKSVSALFSVCRAVREIVLQDCWGLDNSIFCFAMMCRRVKLFYLEGCSLLTTEGLELVVHSWKELQSLRVVSCKNIKDSEISTALATLFITLKELRWSPDTKSLLSSSVTGITMVKKGGKFFKRAR* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0077 485 MobiDBLite consensus disorder prediction 1 24 - -
Pvu11g0077 485 SMART LRR_CC_2 268 292 IPR006553 -
Pvu11g0077 485 SMART LRR_CC_2 191 216 IPR006553 -
Pvu11g0077 485 SMART LRR_CC_2 395 420 IPR006553 -
Pvu11g0077 485 SMART LRR_CC_2 236 267 IPR006553 -
Pvu11g0077 485 SMART LRR_CC_2 344 369 IPR006553 -
Pvu11g0077 485 SMART LRR_CC_2 421 450 IPR006553 -
Pvu11g0077 485 PANTHER UNCHARACTERIZED 47 465 - -
Pvu11g0077 485 SUPERFAMILY RNI-like 107 246 - -
Pvu11g0077 485 PANTHER F-BOX PLANT-LIKE PROTEIN 47 465 - -
Pvu11g0077 485 SUPERFAMILY RNI-like 252 454 - -
Pvu11g0077 485 Gene3D Ribonuclease Inhibitor 211 458 IPR032675 -
Pvu11g0077 485 Gene3D - 66 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0077 Pvu-Chr11 556486 558785 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0077 K10268 - gmx:100812193 790.415