Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0072 ATGTCAAAGGATAAAGACGCTACCAATCTCTCACGCACCTTTAAATACCTATTAGCTACCCAGTTCTTGTCAAGAGGGATTCCTTTTATATTCAATACATGGATTGTAAGGCATCTCACACAAGAGGATTATGCGCTGTATGCAGTGCAGTTTCATCTGTTAGTCACATGTATTTTATTTCTTAGCCGGGAGGGCTTTCGGCGAGCATGCTTGCGAATGGACCTGAAATGTGATGGCACTTCAATGGGAGATGTTGTGAAGCTGATGAAAGTAGTGTGGATGAGTTTCCCACTTGGTCTGTTTTTTACGATTGTAGTATGCCTTTTTGTCTTCTGGTGGCAACAAATAAGTTATTGTAGTCCACATGGGCAAGCTATCTTGATCAATGGTTTTGCATGTATTTTGGAGCTATTGGCTGAGCCTGTGTACATTCTCTCACAAAGCATGGTGTTACTTAAATTGCGGCTGATGGTTGAGACTATAGCCACTCTGTTACGGTGCTTGACAATGTATTTTCTAATCATCAAGCAAACTGGAATCGAAAAATCAATCATATTTGCTTTGTCACAGTCTGCATATGGAGCCTGCTTATTTCTTGGTTATTGGGGCTATCTTTTGCTTTTCCAAAAATTTAAGGTTTCATACCTCTTTCCATTCAGAAAGGGAAAACTGATTGATTTTGACAAGCAGCTGTCCAAGATGTGTATCCTGTTTACCTTTCAATCATTTCGAAAATTGATCCTTCAAGAAGGAGAAAAGATAGTACTTGTATGGTTGGATACACCATATAATCAGGCAGTATACGGCCTGGTGGACAAATTGGGTAGCTTAGTGGTGAGACTTGTCTTTTTACCTTTTGAAGAAAGTTCTTATGCAACATTTGCAAGGTCTGCTTCAGGAGAATATCCAGGAAAAAGCAAGAAATTGGGAAATGGCTTGATGGAATCCCTTAAGTTAGTTTTTTTGATTGGCCTTGTTTTTATGGCATTTGGTCCAAGTTATTCTTATTCACTCATTAGATTGCTTTATGGTGAAAAATGGAGTGATGGAGAAGCGTCAACTGCCCTTCGTTGTTACTGCTTTTATGTCATTGTTTTGGCCATGAATGGAACCTCTGAAGCCTTTATGCATGCAGTTGCAACCGAGAGCCAACTCAAGCGTTCAAATGATTCACTACTTATTTTCTCGTTGATCTATATAATTTTGAATGTCCTGCTAATAAGATTAGTTGGGGCAGTTGGTTTGATAATGGCAAATTCCCTCAATATGACCCTGAGGATTTTATACTCTGCTATATTCATAAAGAATTACTTCCAGGGATCTTCCTCATTTTCTTTCTATGGATGTTTGCCGTCGGGATGGATTATTCTGTTACTTTCAGGCATAATCACTCTAATTTCTGAGAATGTACTTTTGGACAGAGATCATTTCTGGCCATCATTCATGGTCCATTTCTCTGTTGGGCTCGGTTGCTTCTGTGTGTCATCATACGTGATCTATTGCCGGGAAAAACCTTTCATCAGAAGACTTGTTCGCTTTAATGACCATGTGGACTGA 1557 0.3937 MSKDKDATNLSRTFKYLLATQFLSRGIPFIFNTWIVRHLTQEDYALYAVQFHLLVTCILFLSREGFRRACLRMDLKCDGTSMGDVVKLMKVVWMSFPLGLFFTIVVCLFVFWWQQISYCSPHGQAILINGFACILELLAEPVYILSQSMVLLKLRLMVETIATLLRCLTMYFLIIKQTGIEKSIIFALSQSAYGACLFLGYWGYLLLFQKFKVSYLFPFRKGKLIDFDKQLSKMCILFTFQSFRKLILQEGEKIVLVWLDTPYNQAVYGLVDKLGSLVVRLVFLPFEESSYATFARSASGEYPGKSKKLGNGLMESLKLVFLIGLVFMAFGPSYSYSLIRLLYGEKWSDGEASTALRCYCFYVIVLAMNGTSEAFMHAVATESQLKRSNDSLLIFSLIYIILNVLLIRLVGAVGLIMANSLNMTLRILYSAIFIKNYFQGSSSFSFYGCLPSGWIILLLSGIITLISENVLLDRDHFWPSFMVHFSVGLGCFCVSSYVIYCREKPFIRRLVRFNDHVD* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0072 518 Pfam Rft protein 13 511 IPR007594 GO:0006488|GO:0016021
Pvu11g0072 518 PANTHER ENDOPLASMIC RETICULUM MULTISPAN TRANSMEMBRANE PROTEIN-RELATED 4 515 IPR007594 GO:0006488|GO:0016021
Pvu11g0072 518 CDD MATE_rft1 9 440 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0072 K06316 - gmx:100817452 942.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0072 11 504990 516543 Pvu11g0072 11 504990 516543 ECH