Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0071 ATGGCTCTTCTCACTTTCCCTCTCTTTTCTTCCCATTTTCCATCGTTTTCTTCGCATTTTCCATCGCTTTCTTCCTTCCCAAACGCTCCTTCTTTCTCTTCAACACGACGCTACTGTTTGACGAAGGCAACTGGAACGGCGATTCTGTGGTTCAAGCACGATCTCCGAACCGATGACCACCCCGCGCTTCTCGCTGCCTCCACCTTTCCCTCGCTCCTTCCTATATATGTCTTCGATCACCGCATTCTTTCCCGTTTCTCCGACGAGACGCTGGAGCTGCTTCTGCTTGCTCTGCAAGATTTGAGGAAGGCGCTGAAGGATCGCGGTTCCGATTTGATGATCAGATTCGGCAATGCGGATAGCGTCGTGCAGCAACTTGCAACCGAGGTCAAAGCCACTTGTGTGTTCGCGGAACAAGAGGTGGAGTATGAGCTGCGCCTCATCGTAGATGCGCTCAAACAGCGATTGAAGTCCGTCGCTGTTCCGCAAGGGAGTCCTGGGATTGAGTTGTGGCAAACTCCATTTTATGAAGTGAAGGATGTGCAGAATCTTCCTGCGTCATATGATGAGTTTAAGAAACGTCGATTCCCTGTGACTACACCACTTCAGCTGTCAGTGTCAACGTTACCTGGTGTAGAGATAGAACTGGAGTGGGGTGTTCTCCCCTCGTATGATGATATAAAGGGATTTATGAGCAGCAGCGAACGTAAATCAGGAGAGAATTGGAGTTTAATCAGGGAGGTCTCAGCTGAAACCGTTTTACGCAGAAAAGCATTGGAATATGGCGATAGAATTGAAAGAAGTTCTAGCTTTGGGCAAACACTGTCCAGGGAGCGTAGTGGATCTGTTTTTGTGACAAAAGAAGGAAATATCGTAGGAGGTGGTACAGACAGTGTACTGAATGCACTAGCTGCATATCTAAGATATTTGGAAGGAACAGCTCGTGATGACTGGCAAGAGGTGCATGAAAGAGTGCGTGCTTCTGAAAGTCGGGATGGAGCATCATTTATTGGTCTATTCGGTCCTGCCCTGTCTCTTGGCATTATATCTAGAAGAAGAGTATATTATGAAGCTATCAAATATGAGCAAGAAAGAAATGCAGGTTTTTTATCACCCTTTGGTTATTCAGCTGCCACAATTGCAGCAGCAGTTGATGCTGTGTGCTCAAAGGAGTGGTATTGGCTTTTGGCTTTGAGAAATCAGAAAAACAATGACACAGGATACTCAACAAGGATATGGAAATGGAAAGGATTTCTTATCGAGTATACAGTTGCTGGTGAAGATGGTCCTGCCGTTCTTCTTGTGCATGGTTTTGGTGCCTTTTGGGAGCATTACCGTGACAACATACGTGGTTTAGCTGAATCTAGAAATCGAGTTTGGGCAATTACTATTTTAGGATTTGGCAAATCAGAAAAGCCAAATGTGGTATATACTGAACTCTTGTGGGCTGAACTATTGAGAGATTTTATTGTTGCTGTTGTGGGTGAACCAGTTCATATTGTTGGCAACTCAATTGGCGGTTATCTTGTTGCTATTGTTGCTGGTATTTGGAGTGATTTGATCAAATCCCTTGTCTTGATCAACAGTGCGGGCAATGTCATCCCAAGTTATTCATTCATACCACTGTCTAGAGTTCAGGATAGGCAAACTTCAGGGGCTTCCTGGTTGGGGTCTCGCATTCTTCTATTCTACTTGAGGCTAAGAACTCAGGAGTTAGTTAAGAAATGTTATCCAACTAGGGTTGAAAGAGCAGATGATCGGCTCATAAATGAAATGCTAAGAGCATCATACGATCCTGGTGTGCTTGTGGTGTTGGAAAGCATCTTTAGCTTTAATCTTTCCATACCTGTAAACTTTCTTCTCGAAGATGTCAAGGGAAAGGTCCTAATTATACAGGGGATGAAAGATCCGATTTCTGACTCCAACTCCAAGGTGGCTATGCTTAAAGAACACTGTGATGGAGTTTTAATTAAGGAGTTAGATGCTGGCCATTGTCCACACGATGAGGTGCCAGAACGAGTGAATACTATCATTTGTGAGTGGATAATTGGTGTAGAAAGTAACATTTTGGTAGAATCTCCGGTGTAA 2088 0.4444 MALLTFPLFSSHFPSFSSHFPSLSSFPNAPSFSSTRRYCLTKATGTAILWFKHDLRTDDHPALLAASTFPSLLPIYVFDHRILSRFSDETLELLLLALQDLRKALKDRGSDLMIRFGNADSVVQQLATEVKATCVFAEQEVEYELRLIVDALKQRLKSVAVPQGSPGIELWQTPFYEVKDVQNLPASYDEFKKRRFPVTTPLQLSVSTLPGVEIELEWGVLPSYDDIKGFMSSSERKSGENWSLIREVSAETVLRRKALEYGDRIERSSSFGQTLSRERSGSVFVTKEGNIVGGGTDSVLNALAAYLRYLEGTARDDWQEVHERVRASESRDGASFIGLFGPALSLGIISRRRVYYEAIKYEQERNAGFLSPFGYSAATIAAAVDAVCSKEWYWLLALRNQKNNDTGYSTRIWKWKGFLIEYTVAGEDGPAVLLVHGFGAFWEHYRDNIRGLAESRNRVWAITILGFGKSEKPNVVYTELLWAELLRDFIVAVVGEPVHIVGNSIGGYLVAIVAGIWSDLIKSLVLINSAGNVIPSYSFIPLSRVQDRQTSGASWLGSRILLFYLRLRTQELVKKCYPTRVERADDRLINEMLRASYDPGVLVVLESIFSFNLSIPVNFLLEDVKGKVLIIQGMKDPISDSNSKVAMLKEHCDGVLIKELDAGHCPHDEVPERVNTIICEWIIGVESNILVESPV* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0071 695 Gene3D alpha/beta hydrolase 399 683 IPR029058 -
Pvu11g0071 695 Pfam Alpha/beta hydrolase family 432 675 IPR000073 -
Pvu11g0071 695 SUPERFAMILY Cryptochrome/photolyase, N-terminal domain 46 203 IPR036155 -
Pvu11g0071 695 Gene3D HUPs 31 197 IPR014729 -
Pvu11g0071 695 PANTHER DNA PHOTOLYASE 39 690 - -
Pvu11g0071 695 ProSiteProfiles Photolyase/cryptochrome alpha/beta domain profile. 45 178 IPR006050 -
Pvu11g0071 695 Pfam DNA photolyase 48 193 IPR006050 -
Pvu11g0071 695 SUPERFAMILY alpha/beta-Hydrolases 406 682 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0071 Pvu-Chr11 500293 504845 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0071 416 541 Acyl Lipid Metabolism Gene Families AT2G26740 29.323 4.45e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0071 - - gmx:100813721 1174.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0071 11 500293 504845 Pvu11g0071 11 500293 504845 ECH