Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0060 ATGAAGAAGACAAAGACAAAGACAATGAACCCTGATTCACAAATTCCATTGCTGATTCCTCCAACTTCCCCAACAATGGAAAGTGGAGGAAGACCACAAAAGGGTACCCTTCTTTTCATTGTTTCAGTGCTTTTTCTCATGCCATTGGCTGCACTCTTCATAAGCCTGCATATCCATAATCTTCAGAAGGCTTTCAGAAGGGAGGAAAATTCCCTGCCATTGTTTCCCAGAGGTGTTGCAGAAGGAGTTTCAGCCAAGTCAAATCCTTATCTGTGGCAGAAAGGTTCATATAATTGGACAAATGCCATGCTATCGTGGCAAAGAACAGCTTTTCATTTTCAACCTCAAAAAAACTGGATGAACGATCCTAATGGTCCATTGTTTTACAAGGGGTGGTACCATATATTTTACCAATACAATCCTGAGTCAGCTGTGTTTGGCAACATAACGTGGGGCCACGCTGTATCAACGGACTTGATTCACTGGCTCTACCTTCCCATTGCGATGCTTCGAGATTCCTGGTATGATGCAAAAGGTGTATGGTCAGGATCAGCCACGCTTTTGCCAGATGGCAGAATCGTAATGCTCTACACCGGTAACACTCATCAGAACGTGCAAGTCCAAAATCTTGCGTACCCCGCCAACCTATCCGATCCCCTCCTCCTTCATTGGGTCAAATACGCGGATAACCCGGTTGTGTTGCCCCCACCAGGAATTGGGCCGAAGGATTTTCGTGACCCAACAACGGCGTGGGTTGGGCCAGATGACAAATGGAGGGTCCTTATTGGGTCAAAGGTGAACCAGACAGGGCTTTCGTTGGTGTATAAAACCCAAGATTTCATCCACTACGAACTCAATGATGAGTATATGCATGAAGTTCCGGGTACGGGTATGTGGGAGTGCGTGGACTTTTACCCGGTTTCGGTAAATGGGCCTGATGGGCTGGATACATCCGTAAATGGGCCGGGTGTGAAACATGTGTTGAAGTCCAGTTTGGATGACACTAGGGGGGATCATTATGCGATTGGGAGGTACTTCATTGAAAATGATACATGGGTGCCCGATGACCCGAATAAGGATGTGGGTATCGGGTTGAAGTTGGACTATGGAAGATTCTATGCGTCAAAGACATTTTATGACCAAAACAAAAAGAGAAGGGTCCTGTGGGGTTGGATCAACGAATCAGACAGCGAAACCGCTGACCTCAAAAAGGGTTGGGCATCTCTTCAGAGTATTCCAAGAACAGTGGTGTTTGACAAGAAGACTGAAACTCATTTGCTTCAGTGGCCAGTGGAAGAAATAGAGAGCTTAAGGCTTAGAAGTTATGAATTTGAAGAAGTTGTGGTTAAGCCTGGTTCAGTTGTACCACTGGACATAGGCCCAGCCACACAGTTGGACATATTTGCTGAATTCGAAATCGAATATTTAGCATCGAAAGGTACCGGGAAGAAGGAAAATGTAGGGTGTGGAAATGGAGCTTTTGACAGAAGTAGTTTGGGACCATTTGGCATTCTGGCTATTGCAGATGACAAACTTTCTGAGCTGACACCAATTTATTTCCATCTTTCTAACACATCTTTCTTCTGTGTTGATGAAACCAGATCTTCAAAGGCTTCTGATGTTTCAAAACTCGTTTTTGGAAGCGAAGTACCAGTGGTCGGCGATGAAAGATTATCGATGAGAGTATTGGTGGACCATTCAATCATTGAGAGTTTTGCTCAAGGAGGAAGAACTGTGATCTCATCTAGGGTTTATCCAACAGAAGCAATATACGAAGCTGCAAGATTGTTTGTGTTCAACAATGCAACAGACATAAACATCAAGGCCTCACTCAAGATTTGGCAATTGAATTCAGCTTTTATACGTCCCTTTCCCTTTCACTAG 1884 0.4448 MKKTKTKTMNPDSQIPLLIPPTSPTMESGGRPQKGTLLFIVSVLFLMPLAALFISLHIHNLQKAFRREENSLPLFPRGVAEGVSAKSNPYLWQKGSYNWTNAMLSWQRTAFHFQPQKNWMNDPNGPLFYKGWYHIFYQYNPESAVFGNITWGHAVSTDLIHWLYLPIAMLRDSWYDAKGVWSGSATLLPDGRIVMLYTGNTHQNVQVQNLAYPANLSDPLLLHWVKYADNPVVLPPPGIGPKDFRDPTTAWVGPDDKWRVLIGSKVNQTGLSLVYKTQDFIHYELNDEYMHEVPGTGMWECVDFYPVSVNGPDGLDTSVNGPGVKHVLKSSLDDTRGDHYAIGRYFIENDTWVPDDPNKDVGIGLKLDYGRFYASKTFYDQNKKRRVLWGWINESDSETADLKKGWASLQSIPRTVVFDKKTETHLLQWPVEEIESLRLRSYEFEEVVVKPGSVVPLDIGPATQLDIFAEFEIEYLASKGTGKKENVGCGNGAFDRSSLGPFGILAIADDKLSELTPIYFHLSNTSFFCVDETRSSKASDVSKLVFGSEVPVVGDERLSMRVLVDHSIIESFAQGGRTVISSRVYPTEAIYEAARLFVFNNATDINIKASLKIWQLNSAFIRPFPFH* 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0060 627 MobiDBLite consensus disorder prediction 1 30 - -
Pvu11g0060 627 Pfam Glycosyl hydrolases family 32 N-terminal domain 112 430 IPR013148 -
Pvu11g0060 627 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 61 624 - -
Pvu11g0060 627 SUPERFAMILY Arabinanase/levansucrase/invertase 105 431 IPR023296 -
Pvu11g0060 627 PANTHER ACID BETA-FRUCTOFURANOSIDASE 4, VACUOLAR 61 624 - -
Pvu11g0060 627 SUPERFAMILY Concanavalin A-like lectins/glucanases 430 620 IPR013320 -
Pvu11g0060 627 SMART glyco_32 112 576 IPR001362 GO:0004553|GO:0005975
Pvu11g0060 627 MobiDBLite consensus disorder prediction 8 30 - -
Pvu11g0060 627 Pfam Glycosyl hydrolases family 32 C terminal 433 615 IPR013189 -
Pvu11g0060 627 Pfam Beta-fructofuranosidase, N-terminal domain 27 104 IPR021792 GO:0004564
Pvu11g0060 627 Gene3D - 443 616 - -
Pvu11g0060 627 Gene3D Glycosyl hydrolase domain; family 43 116 442 IPR023296 -
Pvu11g0060 627 ProSitePatterns Glycosyl hydrolases family 32 active site. 112 125 IPR018053 GO:0004553|GO:0005975
Pvu11g0060 627 CDD GH32_Fruct1-like 118 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0060 Pvu-Chr11 439550 444057 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0060 19 624 Glycoside Hydrolase AT1G12240 57.978 0.0 736
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0060 K01193 - gmx:100814788 1042.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0060 11 439550 444057 Pvu11g0060 11 439550 444057 ECH