Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0057 ATGGGTTTCCGACAAAGGTTAAGGTTAGTGTTGATGATAAGAGCGTTGGTCTGCACCATGCTACCATTGATGAGTTGTGTGAATGTGAGGGGTTTGCAGCATAATTATGGAGAAGCGTTGTCAAAGAGCATATTATTCTTTGAAGGGCAGAGATCAGGGAAGCTGCCACCAACACAGAGAATGACTTGGAGGAAGGATTCTGCACTTCAAGATCTCTATCTTCTCCCTCCACACACTACTACTACTGTATTTCCTTTCCTTCCCAAAGTTGACTTGGTGGGGGGTTACTACGATGCTGGTGACAACGTGAAATTCAACTTTCCAATGGCGTATTCAACGACCATGCTGGCGTGGAGTGTTATAGAGTTCGGAAAATTCATGGGTGCAGATCTTAAACATGCGCTAGACGCTATTCGTTGGGGCAGTGACTATTTTCTGAAAGCCACAAGCATCCCTGGAATAGTGTTTGCACAAGTTGGTGACCCTTATGCTGATCATAGCTGCTGGCAGAGACCTGAAGACATGGACACTCCCAGAACAGCCTATGCTGTTAGCAGGGACCACCCTGCCTCTGAACTCTCTGCAGAGATTGCAGCAGCACTTGCAGCTTCTTCTATCGTCTTCAGGAAATATCATCTTGCTTATGCTTCAAGACTTCTCCGAAGGGCCATCATGGTGTTCGACTTTGCTGATAAATATAGAGGATCATACAATGACAGCCTTGGACCGTGGGTATGCCCCTTCTATTGTGATTTTAGCGGCTACCAGGATGAATTGGTTTGGGGAGCAGCATGGTTGTTGAAGGCTACTAAGCGCCCTTATTACTTGGATTACATTGACCAAAATATTCATAATCTCACAAACTTTGCTGAATTTGGATGGGACTCAAAGGATGCTGGCATCAACGTGCTCCTTTCAAAGCTTCTAATTAATAATACCAGCTCAGATTCTAAGCCTTTCATCTTCAATGCGGAGAAGTTTGTCTGTGCTGTGCTGCCTGAATCACCATCAGTATCAGTCAAATACTCTCCAGGTGGGCTTCTATTCAAGCCTGGGGGGAGTAACCTACAGCATACAACAGCAATCTCATTCCTGTTTCTGGTTTATGCTGGCTATTTGAAGAAGACAAATACAGAGATTGACTGTGGTGGTAATGTTTTTGCTTCTCCAACCCGACTTAGACAAATAGCAAGAGGCCAGGTGGATTACATACTAGGAAGCAATCCACTGAATATGTCGTACATGGTAGGATATGGAGCAAAATATCCTGAAAGAATACATCATCGAGCGTCGTCATTGCCTTCGATGGATGAGTACCCTCCTCACGTTGGTTGCAAAGAAGGATCATTTTATTTTGAAAGCCAAAATCCAAACCCCAACTTGCTCACGGGAGCTGTTGTGGGGGGACCTTATCTCAATGATTCATACGCAGATCATCGAGCAGATTTTGTACACTCTGAACCTACAACATACATCAATGCACCTCTTGTGGGTGTTTTCGCCTACTTCAAGTCACATTCACCCTAA 1527 0.4466 MGFRQRLRLVLMIRALVCTMLPLMSCVNVRGLQHNYGEALSKSILFFEGQRSGKLPPTQRMTWRKDSALQDLYLLPPHTTTTVFPFLPKVDLVGGYYDAGDNVKFNFPMAYSTTMLAWSVIEFGKFMGADLKHALDAIRWGSDYFLKATSIPGIVFAQVGDPYADHSCWQRPEDMDTPRTAYAVSRDHPASELSAEIAAALAASSIVFRKYHLAYASRLLRRAIMVFDFADKYRGSYNDSLGPWVCPFYCDFSGYQDELVWGAAWLLKATKRPYYLDYIDQNIHNLTNFAEFGWDSKDAGINVLLSKLLINNTSSDSKPFIFNAEKFVCAVLPESPSVSVKYSPGGLLFKPGGSNLQHTTAISFLFLVYAGYLKKTNTEIDCGGNVFASPTRLRQIARGQVDYILGSNPLNMSYMVGYGAKYPERIHHRASSLPSMDEYPPHVGCKEGSFYFESQNPNPNLLTGAVVGGPYLNDSYADHRADFVHSEPTTYINAPLVGVFAYFKSHSP* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0057 508 Pfam Glycosyl hydrolase family 9 36 499 IPR001701 GO:0004553|GO:0005975
Pvu11g0057 508 Gene3D - 32 508 IPR012341 GO:0005975
Pvu11g0057 508 PANTHER ENDOGLUCANASE 20 507 - -
Pvu11g0057 508 SUPERFAMILY Six-hairpin glycosidases 29 505 IPR008928 GO:0005975
Pvu11g0057 508 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 476 494 IPR033126 -
Pvu11g0057 508 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 403 429 IPR018221 -
Pvu11g0057 508 PANTHER ENDO-1,4-BETA-GLUCANASE 20 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0057 Pvu-Chr11 406669 410157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0057 34 507 Glycoside Hydrolase AT1G70710 58.281 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0057 K01179 - gmx:100775752 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0057 11 406669 410157 Pvu11g0057 11 406669 410157 ECH