Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0056 ATGGTGGGTGGATACTATGATGCTGGCGACAACGTAAAATTCAATTTTCCAATGGCATTCACAACGACTATGCTAGCATGGAGTGTGGTAGAATTTGGAGGTCTGATGGGTTCGGAGCAAAAAAATGCGTTAGACGCAATCAGGTGGGGAACAGACTATTTCCTTAAATCCACAAAGTTTCCTAATATTGTTGTGGCACAAGTTGGAAATCCAAATGCCGACCATGACTGTTGGGAGAGACCAGAAGACATGGACACTCCTCGAACCTCGTACTTTCTCACTCCTAAGAAGCCAGGTTCGGAACTCGCTGGTGAGATTGCAGCAGCACTTGCAGCATCTTCCATGGCATTTAGGACAACCGATGCTTCCTATTCCAAAATTCTTCTTAGTAGAGCTATCCAGGTGTTTGACTTTGGAAACAAATTTCGTGGATCTTATAATACGAGCGTAGGTGAGGGAGCATGCCCCTTCTACTGTGATTTTAACGGCTACATGGATGAGTTGATTTGGGGAGCATCATGGTTGTATAAAGCCACAAAAACAGCCAATTATTGGGATTTTGTAAAATCAAACATTCAAACATTGGACGCTGGTCTTTTCGATTTTGGATGGGATGGAAAACATGCTGGCATAAATGTGCTTGTTTCTCAGTGGGCGATGGGTGATTCAGCCACTGCACACCTTTTCATCCCTAATGCAGATAAACTTATGTGTTCTTTTCTGCCGAATTCACCTACCAAATCAGTCTCCTACTCTAAAGGTGGTCTTCTATTCAAACCTGGAGGAAGTAATCTACAACATGCAACATCTATGTCATTTCTCTTAATTGTTTATGCACGGTACATGAATGCTGTGAAGAAAACAATACCTTGTGGTCAACAAGTTGTGAATCCAAATACCCTGATAAATATTGCAAAACATCAGGCTGATTACATTCTGGGGAAAAATCCAATGGGAATGTCATACATGGTGGGGTTTGGAAGCAAGTTTCCTAAGAAGATACACCATCGTGGTTCAGTGATACCATCTTTGGATACACACCCACAACACGTTGGGTGTAGAGATGGAGATAAATTCTTCAAATCAGATGAACCCAATCCCAACGTTCTCACAGGTGCTGTTGTTGGAGGACCAGCATTCGATGATTCCTTTCAGGATTCCCGTTCCATTATCACCCAATCAGAACCAACCACTTACATCAACGCTCCTTTTGTTGGTGTTTTGGCTTACCTCAACAAACCCACTATTACTTGA 1254 0.425 MVGGYYDAGDNVKFNFPMAFTTTMLAWSVVEFGGLMGSEQKNALDAIRWGTDYFLKSTKFPNIVVAQVGNPNADHDCWERPEDMDTPRTSYFLTPKKPGSELAGEIAAALAASSMAFRTTDASYSKILLSRAIQVFDFGNKFRGSYNTSVGEGACPFYCDFNGYMDELIWGASWLYKATKTANYWDFVKSNIQTLDAGLFDFGWDGKHAGINVLVSQWAMGDSATAHLFIPNADKLMCSFLPNSPTKSVSYSKGGLLFKPGGSNLQHATSMSFLLIVYARYMNAVKKTIPCGQQVVNPNTLINIAKHQADYILGKNPMGMSYMVGFGSKFPKKIHHRGSVIPSLDTHPQHVGCRDGDKFFKSDEPNPNVLTGAVVGGPAFDDSFQDSRSIITQSEPTTYINAPFVGVLAYLNKPTIT* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0056 417 Gene3D - 1 416 IPR012341 GO:0005975
Pvu11g0056 417 PANTHER ENDOGLUCANASE 1 414 - -
Pvu11g0056 417 Pfam Glycosyl hydrolase family 9 2 408 IPR001701 GO:0004553|GO:0005975
Pvu11g0056 417 SUPERFAMILY Six-hairpin glycosidases 2 413 IPR008928 GO:0005975
Pvu11g0056 417 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 311 337 IPR018221 -
Pvu11g0056 417 PANTHER ENDO-1,4-BETA-GLUCANASE 1 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0056 Pvu-Chr11 401574 404036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0056 1 412 Glycoside Hydrolase AT1G70710 57.108 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0056 K01179 - gmx:100814370 661.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0056 11 401574 404036 Pvu11g0056 11 401574 404036 ECH