Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0044 ATGGTGTTAGGAGTGAGAGAGATACATTGTAGTGGAGAGCCTGTCCTTGACAATGAGAATGGGGAGGAGCTGATGCGGGTACAACCTGGCACGGACATAGTCCTTGGCAACCTTCCTCGAGAATCCCCTGGCACGCTCTACATCACTACTAAGCAAGTAATATGGGTGAGTGATGTAGACAAGACTAAAGGGTATGCTGTTGATTTTTTATCAATATCTCTCCATGCTGTCTCTACAGACCCTGAAGCCTACCCTCTTCCTTGTTTATATACCCAGATTGACATTGAAGAAGCTGATGACGACCACTCTGATTCGGAATCCAATCATATCCAACAAGATTTGTCCAATGTTACAGAAATGAGGCTCATTCCCTCTGATCCTACTCAATTGGACACTCTCTTTTCTATATTCTGCCAGTGTGCAGAGCTTAATCCAGAACCAAATGATGAGGAAGTAGAAGAACATGACTGGATTTTCAGTGCTGATCAGATGGTAGATGAAGAAGCAGAGGACGAATGTTATATCGCTCACAATCCAGCCAACTCTATTGGTCAGTCAAATGGAAATCATGACCTAGCTCGTACAATACTTGAGCTTCAAATCAATGATCGAAGATTTGAGGATGCAGAAGAGATGGAGGATAATGGAGATGGCACCCATCATTGA 666 0.4354 MVLGVREIHCSGEPVLDNENGEELMRVQPGTDIVLGNLPRESPGTLYITTKQVIWVSDVDKTKGYAVDFLSISLHAVSTDPEAYPLPCLYTQIDIEEADDDHSDSESNHIQQDLSNVTEMRLIPSDPTQLDTLFSIFCQCAELNPEPNDEEVEEHDWIFSADQMVDEEAEDECYIAHNPANSIGQSNGNHDLARTILELQINDRRFEDAEEMEDNGDGTHH* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0044 221 Pfam Regulator of volume decrease after cellular swelling 44 169 IPR039924 -
Pvu11g0044 221 PRINTS Nucleotide-sensitive chloride conductance regulator (ICln) signature 41 56 IPR003521 GO:0000387|GO:0005829|GO:0005886|GO:0006821|GO:0006884|GO:0034709|GO:0034715
Pvu11g0044 221 PRINTS Nucleotide-sensitive chloride conductance regulator (ICln) signature 64 78 IPR003521 GO:0000387|GO:0005829|GO:0005886|GO:0006821|GO:0006884|GO:0034709|GO:0034715
Pvu11g0044 221 PRINTS Nucleotide-sensitive chloride conductance regulator (ICln) signature 115 127 IPR003521 GO:0000387|GO:0005829|GO:0005886|GO:0006821|GO:0006884|GO:0034709|GO:0034715
Pvu11g0044 221 Gene3D - 16 152 IPR011993 -
Pvu11g0044 221 PANTHER BNAA02G33340D PROTEIN 6 217 - -
Pvu11g0044 221 PANTHER CHLORIDE CONDUCTANCE REGULATORY PROTEIN ICLN 6 217 IPR039924 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0044 K05019 - gmx:100790816 388.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g0044 11 321282 324909 Pvu11g0044 11 321282 324909 ECH