Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0042 ATGGATAGAAATGTTGATGCGGAGATTGTGATCGTTGGAGCTGGTATTTGTGGCCTTGCAACAGCCCTTGCCCTTCACAGGAAGAGGATTAAAAGTGTGGTGTTAGAAAGATCAGAGACGGTAAGAGCAACAGGAGCAGCTATAATAGTGCAGGCAAATGGGTGGCATGCACTTCATCAGCTTGGCATTGCTTCAACACTTAGACAAACTGCTATTCCAATACAAAGGGGAAGATTCATATCTCTTAATGAGGCTGAGCCAATGGAATTTCCATTTGGGGTTAATCAGGAATTTCGTTGTTTAAAGCGTAGTGATTTGGTGAAAGTGATGGCCGATAATTTACCCAAAGGGACTATACGAACCAACTGTCAAGTGCTTTCTATTGATTTAGATCCTGTAACAAACTTTCCTCACCTTATGCTTAGCAATGGAACTGTCATTCATGCCAAGGTTGTTATTGGATGTGATGGTGTGAATTCTGCCATTGGAAGCATGTTTGGGTTATACAGAACCACACTCTCCCTCTTCTCCACATGTGTTGCACGAGGCTTCACAAATTATCCAAATGGTCATCAATTTGCCAGTGAATTTGTTATGATGAGCAGAGGCCAAGTTCAACTTGGAAGAATTCCAGTCACAGACAAACTCGTTTACTGGTTTGTCACAAGGCTAAGAACTTCTAGAGATTCAACAATTTGGAAAGACCCAGTTCTCATTAGACAATCCTTGATGGAATCAATGAAAGGTTTCCCAGAAGGGCCTACGGAGATGATTAAAAACTGCAACTTGAGCTTCTTGCACCTCACTGAGTTGAAGTATAGGGCACCATGGGAGTTGCTCTTTAACAGCTTCAGGAAAGGAACAGTGACAATTGCTGGTGATGCAATGCATGCCACTGGGCCATTCGTTGCACAGGGTGGCTCAGCCTCCATAGAAGATGGCATTGTTCTTGCTAGATGCCTGGCACAAAAGAAGTTCAACAATGCAAAGAAAACAGAAGAAACTGAAATAAACATTGCAGTGGCAGAGGAAGCATTTGATGAGTATGTGAGAGAGAGGAAGATGAGAAACTTTTGGCTCTCTTTTCATTCCTTCCTTGTTGGGAAGAAGCTTGACACAAAATCTTCCATAATCAGATTCATTATCCTTGCAATCATGTCAACTCTGTTCAGAGACCCAGATTGGCATTCCCGCTACCATTGTGGAAATCTATAG 1215 0.4247 MDRNVDAEIVIVGAGICGLATALALHRKRIKSVVLERSETVRATGAAIIVQANGWHALHQLGIASTLRQTAIPIQRGRFISLNEAEPMEFPFGVNQEFRCLKRSDLVKVMADNLPKGTIRTNCQVLSIDLDPVTNFPHLMLSNGTVIHAKVVIGCDGVNSAIGSMFGLYRTTLSLFSTCVARGFTNYPNGHQFASEFVMMSRGQVQLGRIPVTDKLVYWFVTRLRTSRDSTIWKDPVLIRQSLMESMKGFPEGPTEMIKNCNLSFLHLTELKYRAPWELLFNSFRKGTVTIAGDAMHATGPFVAQGGSASIEDGIVLARCLAQKKFNNAKKTEETEINIAVAEEAFDEYVRERKMRNFWLSFHSFLVGKKLDTKSSIIRFIILAIMSTLFRDPDWHSRYHCGNL* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0042 404 SUPERFAMILY FAD/NAD(P)-binding domain 8 393 IPR036188 -
Pvu11g0042 404 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 3 404 IPR044560 -
Pvu11g0042 404 Gene3D - 8 376 IPR036188 -
Pvu11g0042 404 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 - -
Pvu11g0042 404 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 148 163 - -
Pvu11g0042 404 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 301 - -
Pvu11g0042 404 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 301 317 - -
Pvu11g0042 404 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 3 404 - -
Pvu11g0042 404 Pfam FAD binding domain 7 324 IPR002938 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0042 Pvu-Chr11 308026 311551 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0042 1 404 Miscellaneous Gene Families AT5G05320 34.140 1.35e-72 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0042 - - gmx:100775200 674.855