Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0029 ATGAGTTGCTCTTCCGGAAAAGTATTATCAGTATGTGCATCACTCTCTTCTCCGCTGCCTCCGTCTCGCACGCCCAATTCCACTTCTAATTCCCTTTCATTCTCATCGCTTTCTTCATTTCCCTCATTACCTTTAACTGCATCTCGCTCCTCTAGAAACCCTCCCAATCCTTCACTCTCTCAGGATTCTTTCATTCGAGCTGCCTATACCCGAAGATCTCGTGGTGAAGCTGCAAAGAAGCCGAACAGGAAATCATGGAAGCAGAGGACAGATATGTACATGAGACCATTCTTGCTGAATGTTTTCTTCTCAAAAAGGTTTATTCATGCCAAAGTGGTACACCGTGGAACAAGCAAAGTCATATGTGTGGCTACCACAAACGCCAAGGATCTTCGAAACTCCCTTCCATCCTTGATTGATCACAACGCATGTAGAGTTGTTGGAAGGCTTATTGCTGAGCGATCAATGGAAGCTGATGTATACGCAGTGGCCTATGAACCAAGAAAGGATGAAAGAATTGAAGGTAGACTAGGGATCGTTCTTGATACTATTAAGGAAAACGGTATTCTTTTTGCTTGA 579 0.4387 MSCSSGKVLSVCASLSSPLPPSRTPNSTSNSLSFSSLSSFPSLPLTASRSSRNPPNPSLSQDSFIRAAYTRRSRGEAAKKPNRKSWKQRTDMYMRPFLLNVFFSKRFIHAKVVHRGTSKVICVATTNAKDLRNSLPSLIDHNACRVVGRLIAERSMEADVYAVAYEPRKDERIEGRLGIVLDTIKENGILFA* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0029 192 PANTHER OS02G0689700 PROTEIN 7 191 - -
Pvu11g0029 192 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 7 191 IPR005484 GO:0003735|GO:0005840|GO:0006412
Pvu11g0029 192 SUPERFAMILY Translational machinery components 93 189 - -
Pvu11g0029 192 MobiDBLite consensus disorder prediction 1 64 - -
Pvu11g0029 192 Gene3D Ribosomal protein S11 51 192 IPR036967 GO:0003735|GO:0005840|GO:0006412
Pvu11g0029 192 CDD Ribosomal_L18_L5e 86 189 - -
Pvu11g0029 192 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 94 191 IPR005484 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0029 Pvu-Chr11 208584 210191 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0029 K02881 - gmx:100803727 280.026