Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0022 ATGGCCCAAGAACCCCAAAATCCACCTCCTCCTCAGGAAGTTCCGCCCCTCGTCGACCCTGTTCCCGTCGACAACCCACCCACCACCCAACCTGAACCGGAACCTGAACCTGAAGTCCAACCACCCACCATCGAAGCTCAAGCTGAAACTGAAACCCCGGAGAAGGCTCAGGCCGGTGTTGAAGACAAGATTTCTGAATCGGTTTCGTTTAAGGAGGAGACCAATGTCGTCGGCGACCTCCCCGAGGCCCAGAAGAAAGCCCTTGAGGATCTCAAGAAGCTTGTTCAAGAGTCGCTTAACAAACGCGACCTAACTGCCCCCAAGCCCGCCACACCGGAACCAGAGAAGAAGAAACCGGACACCGTCAAGGAGCCGGAAGTGGCAGCAGGAGAGGCCGCGGAAGAAGCGGAGAAGAAGGCACCGGAAGTTTCGGAAGAGAAGAAGGATGTTGAAGTGAAAGAAGAGACGACGGAAATAGAAGTGACGGAAGACAAGAAGGATGCTGAGGTGAAAGAAGAGACGAAGGAAGTAGAAGTGACGGAAGAGAAGAAGGAAGTAGAAGTGACAGAAGAGAAGAAGGATGTTGAAGTGAAAGAAGAGAAGAAGGAAGTAGAAGTGATAGAAGAGAAGAAGGATGATGAAGTTAAAGAAGAGAAGAAGGAAGTAGAAGTGATAGAAGAGAAGAAGGATGATGAAGTGAAAGAAGAGAAGAAGGAAGAAGAGGTGACGGAAGAGAAGAAGGAAGAAGAAGTGACAGAAGAGAAGGAGAAGGTAGAAGAGACGACGGTGGTGGAAGAGGAGGTTGGTCCGGAGGAAGTGGAGATATGGGGAATTCCGCTGCTGGCGGATGAGAGGAGCGATGTGATTCTGCTAAAGTTTCTGAGAGCGAGGGATTTCAAGGTGAAGGAGGCCTTCACCATGCTCAAGAACACCGTGCGTTGGCGGAAGGAATTCGGAATAGACGCTCTGGTACTGGAAGATTTTGGAAGCGATTGGGACAAGGTGGTGTTCACCGATGGACAAGACAAAGAAGGACACCCAGTGTGCTACAACGTGTTCGGTGAGTTCGAGAACAAGGAGTTGTACAACAAGGCCTTTTCGGACGAGGAGAAGCGCAACAAGTTCATCAGGTGGAGGATTCAGGTGCTGGAGAAGAGCGTGAGAAGCCTTGACTTCTCACCCACTGCCATCTCCACCATTGTGCAGGTCAACGACCTCAAGAACTCTCCGGGACTCGGCAAGAGGGAACTCCGGCAAGCCACCAATCAGGCCCTTCTCCTGCTTCAGGATAACTACCCTGAGTTTGTGGCCAAGCAGATATTCATCAATGTTCCATGGTGGTACCTTGCCTTTTATAGGATGATCAGTCCCTTCTTCACACAGAGGACCAAGAGCAAGTTTGTGTTTGCTGGGCCATCCAAGTCTGCAGAAACCCTTTTCAAATATATTGCTCCGGAGCTGGTGCCGCTTCAGTACGGTGGACTGAGCAGAGAGGGTGAACAGGAATTCACCACTGCTGATGCTGTTACGGAGGTCACAATCAAACCTGCAACCAAACATGCTGTCGAGTTCCCAGTTTCTGAGAAAAGCCATCTAGTTTGGGAAATCCGAGTGGTGGGTTGGGATGTGAGCTATGTGGCTGAATTTGTGCCCAGCACTGAGGATGGATACACTGTCATTGTGCAGAAGAACAGGAAAATTGCTCCCGCAGATGAGACCGTAATCAGCAACGGTTTCAAAAGTGGTGAAGCTGGCAAGGTAGTACTCACCATAGACAACCAAACATCCAAGAAGAAGAAACTCCTCTACAGGTCAAAGACCAAAGCCATCGCAGAGTGA 1839 0.503 MAQEPQNPPPPQEVPPLVDPVPVDNPPTTQPEPEPEPEVQPPTIEAQAETETPEKAQAGVEDKISESVSFKEETNVVGDLPEAQKKALEDLKKLVQESLNKRDLTAPKPATPEPEKKKPDTVKEPEVAAGEAAEEAEKKAPEVSEEKKDVEVKEETTEIEVTEDKKDAEVKEETKEVEVTEEKKEVEVTEEKKDVEVKEEKKEVEVIEEKKDDEVKEEKKEVEVIEEKKDDEVKEEKKEEEVTEEKKEEEVTEEKEKVEETTVVEEEVGPEEVEIWGIPLLADERSDVILLKFLRARDFKVKEAFTMLKNTVRWRKEFGIDALVLEDFGSDWDKVVFTDGQDKEGHPVCYNVFGEFENKELYNKAFSDEEKRNKFIRWRIQVLEKSVRSLDFSPTAISTIVQVNDLKNSPGLGKRELRQATNQALLLLQDNYPEFVAKQIFINVPWWYLAFYRMISPFFTQRTKSKFVFAGPSKSAETLFKYIAPELVPLQYGGLSREGEQEFTTADAVTEVTIKPATKHAVEFPVSEKSHLVWEIRVVGWDVSYVAEFVPSTEDGYTVIVQKNRKIAPADETVISNGFKSGEAGKVVLTIDNQTSKKKKLLYRSKTKAIAE* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0022 612 MobiDBLite consensus disorder prediction 1 40 - -
Pvu11g0022 612 Pfam CRAL/TRIO domain 334 494 IPR001251 -
Pvu11g0022 612 Gene3D - 236 525 IPR036865 -
Pvu11g0022 612 ProSiteProfiles GOLD domain profile. 501 607 IPR009038 -
Pvu11g0022 612 MobiDBLite consensus disorder prediction 230 264 - -
Pvu11g0022 612 MobiDBLite consensus disorder prediction 230 266 - -
Pvu11g0022 612 Coils Coil 190 257 - -
Pvu11g0022 612 SMART sec14_4 329 497 IPR001251 -
Pvu11g0022 612 SMART CRAL_TRIO_N_2 286 311 IPR011074 -
Pvu11g0022 612 PRINTS Cellular retinaldehyde-binding protein signature 289 311 - -
Pvu11g0022 612 PRINTS Cellular retinaldehyde-binding protein signature 452 471 - -
Pvu11g0022 612 Coils Coil 163 183 - -
Pvu11g0022 612 PANTHER PATELLIN-1 1 612 IPR044834 GO:0008289
Pvu11g0022 612 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 340 500 IPR001251 -
Pvu11g0022 612 MobiDBLite consensus disorder prediction 1 83 - -
Pvu11g0022 612 SUPERFAMILY CRAL/TRIO N-terminal domain 71 326 IPR036273 -
Pvu11g0022 612 CDD SEC14 331 495 IPR001251 -
Pvu11g0022 612 PANTHER PATELLIN-LIKE PROTEIN 1 612 - -
Pvu11g0022 612 MobiDBLite consensus disorder prediction 55 69 - -
Pvu11g0022 612 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 507 603 IPR036598 -
Pvu11g0022 612 MobiDBLite consensus disorder prediction 96 212 - -
Pvu11g0022 612 Coils Coil 133 153 - -
Pvu11g0022 612 MobiDBLite consensus disorder prediction 108 212 - -
Pvu11g0022 612 SUPERFAMILY CRAL/TRIO domain 336 496 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0022 Pvu-Chr11 169275 172033 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0022 290 474 Acyl Lipid Metabolism Gene Families AT5G47730 28.000 1.09e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0022 - K19996 gmx:100794623 605.905