Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0017 ATGAACAAGCTGGTGGTGGAGGTTGTGGATGCAAGCGACCTCATGCCCAAAGACGGGGAAGGGTCAGCCAACCCCTTTGTAGAGGTGAAGTTTGATGAGCAGCAGCACAGTACTGAGAAAAAGCACAAGGAGCTGAATCCTTATTGGAACCAGAAGCTGGTGTTCCACATCGATGACCCGAGAGATCTTGCGCACAAGACAATTGAAGTGGTTGTGTACAATCACAATGATCGGAACCACAACAACTTCCTTGGAAGGGTGAGGCTTTCAGGTGCTTCCATCCCTCTATCGGAGTCCCAGGCCCGTGTGGAACGCTACCCACTTGAGAAACGTGGCCTCTTTTCAAACATCAGGGGAGATATTGCTCTCAAGTGTTATGCGCTGCATGATCCTCTTCCTCCCCCGCAACCCCAGGACGGCAGTGCTGATCCTGCTGCTGCTGAACAACATCGCCCTCCCCCTCCCCCGGAGGAGGATCAGTACACTCCCCTGCAAGAAATAAACCCCAACATGGTGGCAGACGAGGAAAGCGTGGTTGGTGAAGGGGAGGAGAAGAAGAAGAAGAAAATGAAAAAGAAAGAAAAGGAAGTGAGGACTTTTCACTCTATACCAGCTGCAGCTGCTGCACCGAAGGCCCAGCCCCAGTTCCAGGCGGCGGCAGTGGAAACGGTGAGGAGGGCTGACTTCGCAAAGGCTGGACCACCGAATGTGATGTTGATGCAAATCCCAAAGCAAAACCCAGATTATGGACTGGAAGAGACAAGTCCTCCTCTGGCGGCTCGGTTGCGGTACAAAGTAGGGGACAAGATATCAACCACCTACGACTTGGTGGAACAGATGCATTACTTGTACGTTAATGTGGTGAAGGCAAGGGATCTCCCCGTGATGGATATCTCGGGAAGCCTTGACCCTTATGTGGAAGTCAAGGTGGGTAATTACAAGGGCCTCACCAAGCACCTGGACAAGAATCAGAACCCCGTTTGGAAGACAATCTTTGCCTTCTCGAAGGAGAGGTTGCAATCAAATTTGCTTGAAGTGACGGTGAAGGACAAGGACATTGGCAAAGATGATTTTGTTGGAAGAGCTCTGTTTGATCTGACTGAGATTCCTCTTCGGGTGCCCCCAGACAGCCCCTTGGCTCCTCAGTGGTACAGATTGGAGGACAAGAAGGGCCAAAAAGTTTACAACAATGGCGAAATCATGCTTGCTGTTTGGATGGGAACACAGGCCGACGAGTCCTTCCCGGAGGCCTGGCACTCTGACGCTCACAACGTCGGCCACTCCAACCTTGCAAACACTCGCTCAAAGGTATATTTCTCACCCAAGCTTTTCTATCTTAGAATTCAAGTCATCGAAGCTCAGGATCTTGTTCCTTCCGACAAAGGAAGAGCCCCGGACGCTGTTGTTAGAGTACAGCTCGGGAACCAGATGAGATTCACCCGCCCTTCTCAATTGAGAAGCACCAACCCAGTTTGGAACGACGAGCTTATGTTTGTGGCTGCCGAGCCATTTGAGGATTTCATCATTGTGACTGTGGAGGACAAAGTGGGTCCTAGTGCTGAAATCTTGGGAAGGGAGATCATATCAGTTAGAAGTATTCCACCCAGACACGAGACCAGCAAGCTCCCTGATTCTCGTTGGTTCAATTTGCACAGGCCCAGTGCTGTCGGTGAGGAAGAAACGGAGAAAAAGAAGGAGAAATTCTCGAGCAAGATTCACCTCCGAATGTGTCTGGAGGCCGGGTACCATGTGCTGGATGAGTCCACGCATTTCAGCAGTGATCTTCAGCCATCCTCCAAACATTTGAGGAAGAAAAACATTGGCATCCTCGAACTCGGGATACTGAGTGCCCGCAATTTGGTGCCCCTGAAGGGCAGGGAAGGTAGGAGCACCGATGCTTACTGCGTGGCCAAGTATGGCAACAAGTGGGTTCGAACCAGAACTCTGCTTGACACACTCACCCCTCGATGGAATGAGCAATATACGTGGGAAGTTTATGATCCATGCACTGTCATCACAATTGGGGTTTTTGACAACCATCACATCAATGGGAGCAGTGATGCAAGGGATCAGAGAATTGGAAAGGTAAGAATCCGGTTATCAACTCTGGAAACTGATAGGGTGTATACTCATTTTTATCCTCTGCTGGTCCTCCAACCCAATGGCCTGAAGAAGAACGGAGAGCTTCACTTGGCCGTGAGATTCACATGCACGGCTTGGGTGAATATGGTAGCCCAGTATGGCAGGCCTTTGCTTCCCAAAATGCATTATGTCCAACCCATACCTGTTAGGCACATAGACTGGCTCCGCCACCAGGCCATGCAGATTGTGGCAGCACGCCTATCTAGAGCTGAGCCACCCCTCAGGCGTGAAACAGTTGAGTATATGCTCGACGTTGATTACCATATGTGGAGTCTAAGGAGAAGCAAAGCCAATTTTCATCGCATAATGTTAATCCTCAAAGGAGTTACAGCTGTTTGCAAATGGTTTGATGACATCTGCACCTGGAGAAACCCAATCACAACTTGCCTTGTTCACGTCCTGTTCTTGATACTGGTTTGCTACCCGGAACTGATATTGCCCACCATTTTCCTTTACTTGTTTGTAATTGGAATTTGGAATTACCGGTTCAGGCCAAGGAAACCACCCCATATGGATGCCAGGTTGTCTCAGGCAGAAAATGCCCACCCAGATGAACTGGACGAGGAATTTGACACTTTTCCATCCACAAAACCTTCAGATATTGTGAGAATGAGGTATGACAGATTGCGGAGTGTGGCAGGTAGAGTGCAGACTGTGGTTGGAGATTTGGCTACTCAGGGAGAAAGAGCTCAAGCCATACTAAATTGGAGAGACTCCAGGGCAACATCTATCTTCATCATCTTCTCGCTCATATGGGCTGTATTCATTTACATCACTCCCTTCCAAGTAGTGGCAATTCTCGTAGGCCTGTATATGCTACGTCATCCTCGATTTAGGAGCAAGATGCCATCAGTACCAGTTAATTTCTTCAAGAGATTGCCTTCCAGATCAGACACGCTTATATGA 3048 0.4931 MNKLVVEVVDASDLMPKDGEGSANPFVEVKFDEQQHSTEKKHKELNPYWNQKLVFHIDDPRDLAHKTIEVVVYNHNDRNHNNFLGRVRLSGASIPLSESQARVERYPLEKRGLFSNIRGDIALKCYALHDPLPPPQPQDGSADPAAAEQHRPPPPPEEDQYTPLQEINPNMVADEESVVGEGEEKKKKKMKKKEKEVRTFHSIPAAAAAPKAQPQFQAAAVETVRRADFAKAGPPNVMLMQIPKQNPDYGLEETSPPLAARLRYKVGDKISTTYDLVEQMHYLYVNVVKARDLPVMDISGSLDPYVEVKVGNYKGLTKHLDKNQNPVWKTIFAFSKERLQSNLLEVTVKDKDIGKDDFVGRALFDLTEIPLRVPPDSPLAPQWYRLEDKKGQKVYNNGEIMLAVWMGTQADESFPEAWHSDAHNVGHSNLANTRSKVYFSPKLFYLRIQVIEAQDLVPSDKGRAPDAVVRVQLGNQMRFTRPSQLRSTNPVWNDELMFVAAEPFEDFIIVTVEDKVGPSAEILGREIISVRSIPPRHETSKLPDSRWFNLHRPSAVGEEETEKKKEKFSSKIHLRMCLEAGYHVLDESTHFSSDLQPSSKHLRKKNIGILELGILSARNLVPLKGREGRSTDAYCVAKYGNKWVRTRTLLDTLTPRWNEQYTWEVYDPCTVITIGVFDNHHINGSSDARDQRIGKVRIRLSTLETDRVYTHFYPLLVLQPNGLKKNGELHLAVRFTCTAWVNMVAQYGRPLLPKMHYVQPIPVRHIDWLRHQAMQIVAARLSRAEPPLRRETVEYMLDVDYHMWSLRRSKANFHRIMLILKGVTAVCKWFDDICTWRNPITTCLVHVLFLILVCYPELILPTIFLYLFVIGIWNYRFRPRKPPHMDARLSQAENAHPDELDEEFDTFPSTKPSDIVRMRYDRLRSVAGRVQTVVGDLATQGERAQAILNWRDSRATSIFIIFSLIWAVFIYITPFQVVAILVGLYMLRHPRFRSKMPSVPVNFFKRLPSRSDTLI* 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0017 1015 Gene3D C2 domain 1 130 IPR035892 -
Pvu11g0017 1015 PANTHER BNAA09G30540D PROTEIN 1 1014 - -
Pvu11g0017 1015 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 445 599 IPR035892 -
Pvu11g0017 1015 ProSiteProfiles C2 domain profile. 264 384 IPR000008 -
Pvu11g0017 1015 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 1 1014 - -
Pvu11g0017 1015 CDD C2C_MCTP_PRT_plant 445 597 - -
Pvu11g0017 1015 SMART C2_3c 282 378 IPR000008 -
Pvu11g0017 1015 SMART C2_3c 445 542 IPR000008 -
Pvu11g0017 1015 SMART C2_3c 3 108 IPR000008 -
Pvu11g0017 1015 SMART C2_3c 609 712 IPR000008 -
Pvu11g0017 1015 Gene3D C2 domain 584 737 IPR035892 -
Pvu11g0017 1015 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 142 IPR035892 -
Pvu11g0017 1015 Gene3D C2 domain 267 406 IPR035892 -
Pvu11g0017 1015 Gene3D C2 domain 428 578 IPR035892 -
Pvu11g0017 1015 Pfam Plant phosphoribosyltransferase C-terminal 860 1014 IPR013583 -
Pvu11g0017 1015 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 282 421 IPR035892 -
Pvu11g0017 1015 Pfam C2 domain 282 384 IPR000008 -
Pvu11g0017 1015 Pfam C2 domain 445 550 IPR000008 -
Pvu11g0017 1015 Pfam C2 domain 608 715 IPR000008 -
Pvu11g0017 1015 Pfam C2 domain 3 102 IPR000008 -
Pvu11g0017 1015 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 608 741 IPR035892 -
Pvu11g0017 1015 CDD C2D_MCTP_PRT_plant 609 732 - -
Pvu11g0017 1015 ProSiteProfiles C2 domain profile. 424 548 IPR000008 -
Pvu11g0017 1015 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
Pvu11g0017 1015 MobiDBLite consensus disorder prediction 128 197 - -
Pvu11g0017 1015 MobiDBLite consensus disorder prediction 178 197 - -
Pvu11g0017 1015 ProSiteProfiles C2 domain profile. 591 713 IPR000008 -
Pvu11g0017 1015 CDD C2B_MCTP_PRT_plant 282 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0017 Pvu-Chr11 143276 147229 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0017 1 1015 Lipid Metabolism Gene Families AT1G22610 70.817 0.0 1487
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0017 - - gmx:100778133 1754.57