Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0013 ATGGCGAAATCGGGATCAACCACTGTCTCTGCCTCTGCAAAGGTTCACCCTTCCAACGATCCCGAACTGGATCCTGACTCTTACGCCCTCGAGAAGTTCAGACTCTACGAAACCAGAGCGAGGTTCTACCTGATCGGAAGTGATCGGAACAAGAGGTTCTTTCGAGTCTTGAAAATCGATCGATCAGAGCCGTCGGATCTGAATATCAGCCAAGACCCCGTTCTGTATTCGCCCCAGGAGATCAAGAGCTTGCTCCAGCGGATTGCTGAGGGTAACCGGGCCACTGGGGGTCTCACTTTCGTCGCTAAGGTTTTCGGAATTGCTGGCTGCATCAAGTTTCTCGAGTCTTACTACTTGATTCTCGTTACTAAGCGTAGACAGATTGGTTCTATTTGTGGCCATGCAATCTATAGCATCAAGGAGAGCCAGTTGATAACCATTCCACATGTTTCTATTCAATCTGATTTAGCTCACTCTAAGACTGAGCTCAGGTACAGAAAGCTTTTGTCTAGTGTCGATTTGACCAAGGATTTTTTCTATAGTTACACTTACCCTATAATGCAAAGTTTGCAAAAGAACGTTTCTCCTAGCGAAGATGGAGGGATGTCGTATGATAATATATTTGTTTGGAATGCATATTTGACACAAGCAATCAGGTCAAGATGCAGTAACACTATTTGGACCATAGCTTTAGTTCATGGTCATTTTAGGCAGATTCGTCTATCAATTTTTGGAAGGGACTTCAGTGTTTCCCTGATTTCTAGACGATCGAGACATTTTGCAGGGACACGTTACTTGAAAAGGGGTGTGAATGATCGGGGGAGGGTTGCTAATGATGTTGAGACAGAGCAGATTGTCCTTGATGAAGAAGCTGGCTCTTGCAAGGGAAAAATGAGTTCAGTTGTGCAAATGCGTGGATCAATACCACTTTTTTGGTCACAAGAAGCATCAAGATTTAGCCCTAAGCCTGACATAATTTTGCAGAGGTATGATCCGACATACCAAGCAACTAAGTTGCATTTTGAAGACCTTGCTAAGAGATATGGCAATCCAATTATTGTTCTGAATTTGATTAAGACAGTTGAGAAAAGGCCTCGAGAAATGATGCTGAGGCGTGAATTTGCTAGTGCTGTTGGGTATCTGAACCAAATTCTACCGGTAGAGAACCATCTTAGATTTATTCACTGGGACTTTCACAAATTTGCAAAGAGCAAGTCTGCCAATGTTTTGGCAGTTTTAGGAGCTGTAGCAAGTGAAGCACTTGATTTAACTGGTTTTTACTACAGTGGTAAACCCAGTATAATAAAGAGGACCAACAAGAACAATCGAACAAGCACAGGGAGGGATACTTCACTGAGAGATCTTAGAGCTAGTTCTGGTGATATTGTGAGGATTGGGAACAGTAACGAAATGATAAATTCTGTGGTTAACCGAGAGACTGACTCGAACCACCAGAATAGAAAAGATAATTTTACTAGTGACGCACCACATTTTCAGAGTGGAGTTCTCCGTACCAACTGCATTGACTGCTTGGACCGTACAAATGTTGCCCAGTATGCATATGGTCTTCAAGCTTTAGGACGCCAGCTCCATGCGATGGGTTTGACTGATGTGCCAAAAGTCGATCCTGATAGCAGTATTGCTGCTGCTCTAATGGATATGTATCAAAGCATGGGGGATGCTCTTGCCCAGCAGTATGGTGGTTCAGCAGCTCACAATACTGTGTTTCCGGAGAGGCAGGGAAAGTGGAAAGCAACAACACAATCAAGAGAGTTTTTGAAGTCCATAAAACGATACTATAGCAATGCTTACACAGATGGTGAAAAACAAGATGCAATAAACTTATTTTTAGGTTACTTCCAACCACATGAAGGGAAACCTGCACTCTGGGAGCTGGATTCAGATTATTATCTCCATGTATCTGGGATTGGGGATGATCTAAGTCCTGAGAAGTGTTCTGAACCGAATCCCAAGCCTTCCGGAAGAGGTGGAATAATATTCACCCCTATACCAGCTTGCAGAGAAGACTTCTTACGGATAAAGTTGACATCATTTGACAAGTTAATCGAGAAGACCTGTAGTACAATTAGAAATGTAAGACTATGCTCTGAACCTGATCAGAGACCAGGTGGGACTTCTGGAAACAGTGGAGTGGCACCTGATGCAGCTGAGATACAGCTCAAAAGCCCGAATTGGCTTTTCGGGCAGAGAAAGTATGAAGAGGGTTCCTCTGCTGCAAAAGTAGCGTCTCATGAAACTGACGTTGAAGAATCTCATGCTAATGGATTTTGTGACTTGAATTGGCTTTCCTCTGGCAATGATATGAATGAAGAGGACGTTTTCCAAAGGTACCTTGCAATGACCTCAGCTAATGAGGCGAATGGCTGGTATGGAGGTAGTCTCCTCGGTGATCAAGATGAAAGCAGTGAGATATATAAACATTATGCTGAGCTATGTCAGGGACCTGCCTTGGAACTTTTCCAAAATGACTCTGAGAGGGAGCAACACTACGCCGATGCTTTAAGCACGAGTTCACATGAAATTGTTAATGATACTACAGTTGCGGCAGAAATGGAAGCAGCTCTAAAGGAGTATGACCAAGTTGGTGCTGACCTTGGGATCATTCCCAGATCTTGTAAATCTTTTGGTGATGATCCGAGTTGGCTTACAAGATGGTTAATTGGGGAAGAAAAAGTACAAAGGATATGA 2709 0.4334 MAKSGSTTVSASAKVHPSNDPELDPDSYALEKFRLYETRARFYLIGSDRNKRFFRVLKIDRSEPSDLNISQDPVLYSPQEIKSLLQRIAEGNRATGGLTFVAKVFGIAGCIKFLESYYLILVTKRRQIGSICGHAIYSIKESQLITIPHVSIQSDLAHSKTELRYRKLLSSVDLTKDFFYSYTYPIMQSLQKNVSPSEDGGMSYDNIFVWNAYLTQAIRSRCSNTIWTIALVHGHFRQIRLSIFGRDFSVSLISRRSRHFAGTRYLKRGVNDRGRVANDVETEQIVLDEEAGSCKGKMSSVVQMRGSIPLFWSQEASRFSPKPDIILQRYDPTYQATKLHFEDLAKRYGNPIIVLNLIKTVEKRPREMMLRREFASAVGYLNQILPVENHLRFIHWDFHKFAKSKSANVLAVLGAVASEALDLTGFYYSGKPSIIKRTNKNNRTSTGRDTSLRDLRASSGDIVRIGNSNEMINSVVNRETDSNHQNRKDNFTSDAPHFQSGVLRTNCIDCLDRTNVAQYAYGLQALGRQLHAMGLTDVPKVDPDSSIAAALMDMYQSMGDALAQQYGGSAAHNTVFPERQGKWKATTQSREFLKSIKRYYSNAYTDGEKQDAINLFLGYFQPHEGKPALWELDSDYYLHVSGIGDDLSPEKCSEPNPKPSGRGGIIFTPIPACREDFLRIKLTSFDKLIEKTCSTIRNVRLCSEPDQRPGGTSGNSGVAPDAAEIQLKSPNWLFGQRKYEEGSSAAKVASHETDVEESHANGFCDLNWLSSGNDMNEEDVFQRYLAMTSANEANGWYGGSLLGDQDESSEIYKHYAELCQGPALELFQNDSEREQHYADALSTSSHEIVNDTTVAAEMEAALKEYDQVGADLGIIPRSCKSFGDDPSWLTRWLIGEEKVQRI* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0013 902 ProSiteProfiles Sac phosphatase domain profile. 169 568 IPR002013 GO:0016791
Pvu11g0013 902 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 29 850 IPR043573 GO:0043813|GO:0046856
Pvu11g0013 902 MobiDBLite consensus disorder prediction 1 15 - -
Pvu11g0013 902 MobiDBLite consensus disorder prediction 1 23 - -
Pvu11g0013 902 Pfam SacI homology domain 105 401 IPR002013 GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g0013 Pvu-Chr11 101723 114219 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g0013 1 902 Acyl Lipid Metabolism Gene Families AT1G22620 74.452 0.0 1425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0013 K22913 - gmx:100800092 1694.86