Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g0009 ATGAGTGAGAGTAACGGAAACAGCAGGAGGCGAAATGTTGAAGATCAAGATCTGGGACTGTACTTCTTAGAAGCGTGCAAGGGTAGGGAGATGAAAGAGAGGGAGAAGGAGAAGGTCAAAGAGGAAGAGGAGGAAGAGGAGGAGCCGCCGAGGGAGCTCAACACGATTAACAGCTCCGGTGGCTTCGTTGTGGTCTCCACGGACAAGCTGTCGGTGAAGTACACCAACGTCAACCTTCACGGCCACGATGTCGGTGTAATTCAGGCCAACAAGCCTGCTCCTACCAAACGCCTCATCTACTATTTTGAGATTCATGTCAAGGATGCCGGCGTCAAGGGTCAAATTGCCATTGGCTTCACCTCCGAGACATTCAAGATGCGAAGGCAGCCAGGGTGGGAGGCCAATAGCTGTGGATATCATGGTGACGATGGTCTTCTTTACCGTGGACATGGCAAGGGGGAAGCGTTTGGCCCAACCTATACATCTGGTGATGTAGTTGGTGCCGGAATTAACTACGCTGCGCAGGAATTCTTTTTCACTAAAAATGGCCAAGTTGTCGGCTCTGTTTCCAAAGACATGAAAGGTCCCCTTTTTCCTACTATTGCAGTTCATAGCCAAAATGAAGAGGTGCATGTCAACTTTGGGCAGAAACCATTTACTTTTGACTTAAAAGAATTTGAAGCACAAGAAAGAATGAAGCAGCAACTGAAAATAGAGGAAATTTCTGTGCCACCAAATGTCAGTTACGGAATTGTCCGCTCCTACTTGCTGCACTATGGCTATGAAGATACATTGAATTCATTTGATGTGGCTAGTAAAAGTACTGTTCCTCCTATATACATAGCTCAAGAAAGTGGAATTGATGAGCAGGAAATTACATATGCGTTAAATCATAGAAAGACTCTTCGGCAGCTAATCAGGAAAGGGAACCTTGATGTTGCATTTGGTAAATTGCGTGAATGGTATCCCCAAATTGTTGAGGACAACACGTCAGCTACATGCTTTCTGCTTCATTGTCAACATTTTATCGAATTAGTTCGGGTTGGAGCTCTTGAGGAGGCAGTCAGATATGGAAGAATAGAATTGTCGAGTTTTTATGACTTGCCTGTCTTTAAGGATTTAGTTCAGGACTGTGTTGCTTTGCTGGCATATGAACGGCCTCTAGAATCTTCCGTAGGCTATCTTCTAAAAGACTCGCAGCGAGAAGTTGTAGCTGACACGGTAAATGCCATGATTTTGTCCACAAATCCCAATATGAAAGAATCAAAACATTGCTTGCAGTCCTATCTGGAGAGGTTACTTAGACAGCTCACTGCTTGCTGCTTAGAGAGACGAGCACTGAATGGAGAGCAGGGAGAAGCTTTCCAACTTCAGAGATTACTTAGCAGTAGTAGAAGAGGCTAG 1404 0.4509 MSESNGNSRRRNVEDQDLGLYFLEACKGREMKEREKEKVKEEEEEEEEPPRELNTINSSGGFVVVSTDKLSVKYTNVNLHGHDVGVIQANKPAPTKRLIYYFEIHVKDAGVKGQIAIGFTSETFKMRRQPGWEANSCGYHGDDGLLYRGHGKGEAFGPTYTSGDVVGAGINYAAQEFFFTKNGQVVGSVSKDMKGPLFPTIAVHSQNEEVHVNFGQKPFTFDLKEFEAQERMKQQLKIEEISVPPNVSYGIVRSYLLHYGYEDTLNSFDVASKSTVPPIYIAQESGIDEQEITYALNHRKTLRQLIRKGNLDVAFGKLREWYPQIVEDNTSATCFLLHCQHFIELVRVGALEEAVRYGRIELSSFYDLPVFKDLVQDCVALLAYERPLESSVGYLLKDSQREVVADTVNAMILSTNPNMKESKHCLQSYLERLLRQLTACCLERRALNGEQGEAFQLQRLLSSSRRG* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g0009 467 CDD SPRY_RanBP_like 85 215 IPR044736 -
Pvu11g0009 467 PANTHER RAN-BINDING PROTEIN M HOMOLOG 35 464 - -
Pvu11g0009 467 Gene3D - 26 235 IPR043136 -
Pvu11g0009 467 SUPERFAMILY Concanavalin A-like lectins/glucanases 57 221 IPR013320 -
Pvu11g0009 467 ProSiteProfiles C-terminal to LisH (CTLH) motif profile. 295 353 IPR006595 -
Pvu11g0009 467 SMART SPRY_3 97 218 IPR003877 GO:0005515
Pvu11g0009 467 SMART toby_final6 349 450 IPR013144 -
Pvu11g0009 467 Pfam SPRY domain 99 216 IPR003877 GO:0005515
Pvu11g0009 467 Pfam CTLH/CRA C-terminal to LisH motif domain 297 440 IPR024964 -
Pvu11g0009 467 ProSiteProfiles B30.2/SPRY domain profile. 31 219 IPR001870 -
Pvu11g0009 467 PANTHER RAN BINDING PROTEIN 9-RELATED 35 464 - -
Pvu11g0009 467 SMART ctlh 295 353 IPR006595 -
Pvu11g0009 467 MobiDBLite consensus disorder prediction 32 57 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g0009 K23334 - gmx:100805319 861.292