Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1717 ATGACGGGTGCTGAAGGCCCAAGCTACACAGTAGATGATGCTCTAGTGGCTTTGGGTTTTGGAAATTTCCAAATTCTGGTGCTTGTTTATGCTGGTGTTGGTTGGATTTCAGAAGCAATGGAAATGATGCTACTCTCTTTTGTAGGCCCTGCAGTTCAAGCTCAATGGAATCTTTCCGCTCATGAAGAAAGTTTGATAACCAGTGTGGTTTTTGCAGGCATGCTAATAGGGGCATACTCATGGGGCATTGTTTCTGATAAACATGGAAGGAGGAAAGGATTCCTTATCACAGCGACAGTTACAGCCATAGCTGGTTTTCTTAGTGCATTTGCTCCTAACTATATATTATTAATTGCCCTTCGTTCTCTGGTCGGTGTTGGTTTGGGAGGTGGCCCTGTATTATCATCTTGGTTTCTAGAGTTTGTTCCTGCTCCCAACAGAGGTACCTGGATGGTTATCTTTTCAGCATTTTGGACTGTTGGTACCATTTTTGAGGCCTCACTTGCATGGATTGTGATGCCAAATCTAGGTTGGAGATGGCTTCTTGGGCTGTCTTCTCTTCCCACTTCTTTCCTTCTTCTGTTCTACAAACTGACTCCTGAATCACCAAGATACCTATGCTTGAAAGGAAGAACAGCTGATGCAATTGAAGTTTTGGAAAAAATAGCAAGACTAAATGGAAGAGAACTTCCTTCGGGTAACCTTGTTTCTGACCATGAAATTGAGCTACAACAAATTGATAACCCTTCAGAAGACGCACACTTGCTATCAACGACAACAAATGAAATTGAGCATCCTTCAGGAATGGATTCCAATTTAGGTGGTATCTCATCATTGATGATGCTTCTCTCACCAAAGTTGGCAAGGTCAACAGTTCTATTATGGGCTGTGTTCTTTGGTAATGCCTTTTCGTATTATGGCCTTGTTTTGTTGACAACTGAGCTGAACGGACATAGTAAATGCATGTCACATAAATTGCAGACAGAGAAGTCCCAGGATGTTAGCTACAAGAGTGTTTTTATTGCTAGTTTTGCAGAGCTACCTGGACTCCTCTTGTCAGCTGTGGCAGTCGACAAACTCGGTCGTAAACTATCAATGTCATCCATGTTCTTCATGTGCAGTATTTTTCTTCTCCCGTTAGTATTCTATCTGCCTGAAGGCTTAACAACGGGCCTTTTATTTCTAGCTCGCATTTGCATCACAGCAACCTTCACAATTGTGTATATATATGCACCAGAGATGTACCCAACATCAGTTAGAACAACTGGTGTGGGAATTGCAAGTGCGGTGGGCAGAATTGGTGGAATGATATGCCCTCTGGTTGCTGTGGGTTTAGTACATGGATGTCATCAAACTGCAGCTGTCCTTCTGTTTGAGGTAATAGCTCTTCTTTCAGGAATATGTGTCATGTTCTTACCGATTGAGACCATGGGCCAAGAACTGCGAGATAGTGTGCAAGTCTAA 1464 0.4269 MTGAEGPSYTVDDALVALGFGNFQILVLVYAGVGWISEAMEMMLLSFVGPAVQAQWNLSAHEESLITSVVFAGMLIGAYSWGIVSDKHGRRKGFLITATVTAIAGFLSAFAPNYILLIALRSLVGVGLGGGPVLSSWFLEFVPAPNRGTWMVIFSAFWTVGTIFEASLAWIVMPNLGWRWLLGLSSLPTSFLLLFYKLTPESPRYLCLKGRTADAIEVLEKIARLNGRELPSGNLVSDHEIELQQIDNPSEDAHLLSTTTNEIEHPSGMDSNLGGISSLMMLLSPKLARSTVLLWAVFFGNAFSYYGLVLLTTELNGHSKCMSHKLQTEKSQDVSYKSVFIASFAELPGLLLSAVAVDKLGRKLSMSSMFFMCSIFLLPLVFYLPEGLTTGLLFLARICITATFTIVYIYAPEMYPTSVRTTGVGIASAVGRIGGMICPLVAVGLVHGCHQTAAVLLFEVIALLSGICVMFLPIETMGQELRDSVQV* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1717 487 Pfam Sugar (and other) transporter 60 235 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu10g1717 487 Pfam Sugar (and other) transporter 350 482 IPR005828 GO:0016021|GO:0022857|GO:0055085
Pvu10g1717 487 Gene3D MFS general substrate transporter like domains 21 486 IPR036259 -
Pvu10g1717 487 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 5 486 - -
Pvu10g1717 487 PANTHER MAJOR FACILITATOR, SUGAR TRANSPORTER-LIKE, MAJOR FACILITATOR SUPERFAMILY DOMAIN PROTEIN-RELATED 5 486 - -
Pvu10g1717 487 ProSiteProfiles Major facilitator superfamily (MFS) profile. 27 477 IPR020846 GO:0022857
Pvu10g1717 487 SUPERFAMILY MFS general substrate transporter 14 482 IPR036259 -
Pvu10g1717 487 ProSitePatterns Sugar transport proteins signature 1. 353 368 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1717 Pvu-Chr10 43206271 43210030 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1717 49 485 Organic Solute Cotransporters AT3G20660 26.386 1.00e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1717 - - gmx:100786568 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1717 10 43206271 43210030 Pvu10g1717 10 43206271 43210030 ECH