Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1716 ATGGCGGCAATCCAACCACCGCAGGCTCCGGATCGTACAACCGAAGAGATACCAGCCGAACCAGATAACATGAAGGAGCAGGGTACAGTGACTATAGGTCATTCGAGGGAGACCACAAGTCAATCAGGATCTTTAGGTTCGGGTGGAGATGTTCCTCTGTATCCTCCTAACGTGTATGCTCCCCAAGCCCAGGCTTTCTACTATAGAGGTTTTGACAATGGCAACGGTGAATGGGATGAATATTCTTCATATGTCAATACTGAAGGATTAGAAATTGGATCTCCTGGTGTCTACAATGAAAATCCATCACTTATTTTCCATTCTGGGTATGGCTTCAACCCACAAATGCCTTATGGACCATATTCCCCAGTTACCACACCTTTGCCTTCTGTAGGTGGAGACACACAGTTATACTCCTCGCAGCAATTTCCATACACTGGGCCACCTTATTATCCTCAGCTGATTCCTCCTAGCTTATCATATCTCAATTCACCTACTCCAGTTTCACAGCCAGAGCTCACCAACCTGGTAGGTATTGATCAACAAGTTGATAACATGTTTTTTGGACCAAGAGCGGGCTATCCATCAGTGGGATCTTTTGGTAGAGGCAGCTTTCCTGTAGCACCTGGTTCCTTTGGCTTTCATGAATCCCAACAAGGATTTGAGGGATCAAGATCTGGTGGTATATGGTCAGATTGCTCAAAACCCTCAGAAAGACAAAGATCTTTGATGCCTTTATCGCCATCTGTTTCTCCACGGCCAATGGGTTCACTTGGCTCATTTGGGCCAAGTGTTGGAATGGCCTCTCATCAACAACAAACATTGTATGGGTTTGGATCTGGTTCAAACTCTTATGGTAGAGGCTACCTGCCTAACCAGGGCTCCAGCTTTGGAGATACTTCTATTTCCAATCTTAATGACAGGAATTGTGCTTCTCTTGAAAATAGCAGGAGGCAAGGGCGGCCATCTGCATCTCTTTGCAATTGTAATGGTACTCTTGATATCCTTAGTGAGCAGAACCGAGGACCAAGGGCCTCAAAGCTGAAAAATCAAATTTTGGCTGAAAAAAATTCTGTGGATAATAGTAAAAATAGTGCATCTATTGCCAAGTTTCAAAATGAATCACTCAATCGGTCAGATTTTTCCATTGATTACAAGGATGCCAAATTTTTTGTCATCAAATCTTACAGTGAAGATAATGTTCACAAGAGCATTAAATATGGTGTCTGGGCTAGTACACCAAACGGAAACAGGAAGTTAGATGCTGCATATCGCCAAGCAATGGAGAAGCAAGAGGCCTGCCCTATATTTCTCTTTTTCTCGGTAAATGCTAGTGCTCAGTTCTGTGGGGTAGCTGAAATGGTTGGACCTGTCAATTTTGATAAGAGTGTGGACTTCTGGCAACAAGATAAGTGGAGTGGGCAGTTTCCCGTGAAGTGGCACATAATTAAAGACGTTCCAAACAGTCAGTTTCGTCACATTGTTCTTGAAAATAATGATAACAAGCCTGTGACTAACAGTCGAGATACTCAGGAGGTGAAGTTGCCACAGGGTATTGAAATGTTGACCATTTTTAAAAACTATGAAACTGATGTTTCCATCCTGGATGATTTTGATTTCTACGAAGACCGACAGAAGGCTATGCAAGAACGGAAAGCAAGGCAGCAAAGCAGCATGATGACAACTGGGTTAGTTGGAGAAAATGAACATAGGAGTTCTGCTAACACTACTGGTGATTTTATGAAGCAGATGTCGAAGAGTTTTGCTCTAGTTGTCCGCTTAGATGAGAATAACAATGAAGTTGCTGCAGACAGAGATAGTTTAGTCTCTCATGGCCCTATTGGAAACGTAGTTAAGTCTGATGATGGTCAGTCAGTGACGGCCTCTCCAACTCAAACCAGTTAG 1905 0.4325 MAAIQPPQAPDRTTEEIPAEPDNMKEQGTVTIGHSRETTSQSGSLGSGGDVPLYPPNVYAPQAQAFYYRGFDNGNGEWDEYSSYVNTEGLEIGSPGVYNENPSLIFHSGYGFNPQMPYGPYSPVTTPLPSVGGDTQLYSSQQFPYTGPPYYPQLIPPSLSYLNSPTPVSQPELTNLVGIDQQVDNMFFGPRAGYPSVGSFGRGSFPVAPGSFGFHESQQGFEGSRSGGIWSDCSKPSERQRSLMPLSPSVSPRPMGSLGSFGPSVGMASHQQQTLYGFGSGSNSYGRGYLPNQGSSFGDTSISNLNDRNCASLENSRRQGRPSASLCNCNGTLDILSEQNRGPRASKLKNQILAEKNSVDNSKNSASIAKFQNESLNRSDFSIDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYRQAMEKQEACPIFLFFSVNASAQFCGVAEMVGPVNFDKSVDFWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLPQGIEMLTIFKNYETDVSILDDFDFYEDRQKAMQERKARQQSSMMTTGLVGENEHRSSANTTGDFMKQMSKSFALVVRLDENNNEVAADRDSLVSHGPIGNVVKSDDGQSVTASPTQTS* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1716 634 PANTHER EVOLUTIONARILY CONSERVED C-TERMINAL REGION 5 13 613 - -
Pvu10g1716 634 MobiDBLite consensus disorder prediction 603 634 - -
Pvu10g1716 634 MobiDBLite consensus disorder prediction 218 247 - -
Pvu10g1716 634 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 13 613 IPR045168 -
Pvu10g1716 634 MobiDBLite consensus disorder prediction 620 634 - -
Pvu10g1716 634 MobiDBLite consensus disorder prediction 218 254 - -
Pvu10g1716 634 Gene3D ph1033 like domains 364 540 - -
Pvu10g1716 634 ProSiteProfiles YTH domain profile. 388 525 IPR007275 GO:0003723
Pvu10g1716 634 MobiDBLite consensus disorder prediction 1 48 - -
Pvu10g1716 634 Pfam YT521-B-like domain 388 526 IPR007275 GO:0003723
Pvu10g1716 634 MobiDBLite consensus disorder prediction 28 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1716 Pvu-Chr10 43198372 43205017 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1716 K20102 - gmx:100816860 1206.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1716 10 43198372 43205017 Pvu10g1716 10 43198372 43205017 ECH