Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1710 ATGTATTGCCAATCTTGTGGGACGAATCTGAGGCTCAAACCTCAGCCAAAACTCAATAGACACAGTGACGAATGTCTGGTAAAAATTTCAGACCAAAATACCCAAGGAGTAAGGCGCAGTAAGTCCCACACCGAGAATGAACAAAACCGAAGTGTGGTGTGGTGGAAGTATATAAAACAATACAAGACAAGAGCTCTGCTCAGATTGTGTCTTTGGACTTCAAATGTAAATGCAATGTTTCTCAGAAGCACCGCTTTGCTTTCGTTTCAAATAAATTGCTCCGATTCCAAGCAAGGTGGTCGTGGTTTTGGAGAAAACTCTAACAGGATTAAGACCAACAAATCTGACAAGGGTTTGGTGTCGCAGCAAAGTGTCAAGGGATCAACACCTAAACAGTCTCGCCCTCAGCCTTCTCAGGCACCCCGTTTAAGCTCACAACTTGATGGCAAATCTAGGAAAGATTTTTTGGATGTTGACTTTGAGGAACGCCTAAAAACAGTTAGAAGGTCAGCACTTGAGCAGAAGAAGGCAGAGGAGCAAAAGGAATTTGGAGCAATTGACTATGATGCACCTATTTCTTCTGACGATAAGACAATTTCCCTTCCTACTAAGATTGGAGTGGGTGTAGCTGTTGTAGTCTTCGGTCTGGTTTTTGCTTTTGGAGATTTTCTTCCATCGGGAAGTGTTAGTCCCACTGATGACAGTGCTGTGGTCAGTAGTAAGTTGTCTGAGGAGGAGAAAGCTACTCTCCAGAGTAGGCTCAAGGAATTTGAAGCAACATTAAGTATTTCCCCAAGAGATCCAACTGCTCTTGAAGGAGCTGCAGTTACTCTGGCTGAACTAGGGGAATATGCAAGAGCTGCTTCTCTACTTGATGATTTGACGAAGGTAAAACCAAGTGATGCTGATGTTTTTCGTTTGCTTGGAGAAGTTAAGTACGGACTCAAAGATTATGAAGGGAGTGTTGCTGCATATAAAAGTTCAGCAAGGGTGTCCAAAGATATCGAATTTGAAGTTCTCCGTGGCCTTACCAATTCATTACTTGCTGCCAAAAAGCCAGAGGAGGCTGTTCAATTACTTTTGACTTATCGTGAGGATTTGAATTCAGAAAACCTAAGCAAAAATTCTAATAGCAATGCATCAGACTCACAGAGGCTGGATCCTGTCCAAGTGGAATTACTTCTAGGGAAAGCCTACTCAGATTGGGGCCATGTCAGTGATGCTGTAGCTGTCTATGATCAACTCATATCTGCTTTCCCTAACGATTTTCGTGGATACTTAGCTAAGGGAATCATCCTAAAAGAAAACAAAAATATTGGTGATGCTGAAAGAATGTTCATACAAGCTAGGTTCTTTGCACCAGATAAAGCCAAAGCACTTGTGGACCGTTATTCAAGATGA 1401 0.4233 MYCQSCGTNLRLKPQPKLNRHSDECLVKISDQNTQGVRRSKSHTENEQNRSVVWWKYIKQYKTRALLRLCLWTSNVNAMFLRSTALLSFQINCSDSKQGGRGFGENSNRIKTNKSDKGLVSQQSVKGSTPKQSRPQPSQAPRLSSQLDGKSRKDFLDVDFEERLKTVRRSALEQKKAEEQKEFGAIDYDAPISSDDKTISLPTKIGVGVAVVVFGLVFAFGDFLPSGSVSPTDDSAVVSSKLSEEEKATLQSRLKEFEATLSISPRDPTALEGAAVTLAELGEYARAASLLDDLTKVKPSDADVFRLLGEVKYGLKDYEGSVAAYKSSARVSKDIEFEVLRGLTNSLLAAKKPEEAVQLLLTYREDLNSENLSKNSNSNASDSQRLDPVQVELLLGKAYSDWGHVSDAVAVYDQLISAFPNDFRGYLAKGIILKENKNIGDAERMFIQARFFAPDKAKALVDRYSR* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1710 466 Coils Coil 240 260 - -
Pvu10g1710 466 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 82 466 - -
Pvu10g1710 466 Pfam Tetratricopeptide repeat 276 329 - -
Pvu10g1710 466 Gene3D Tetratricopeptide repeat domain 231 464 IPR011990 GO:0005515
Pvu10g1710 466 MobiDBLite consensus disorder prediction 98 146 - -
Pvu10g1710 466 SUPERFAMILY TPR-like 254 459 IPR011990 GO:0005515
Pvu10g1710 466 SMART tpr_5 389 422 IPR019734 GO:0005515
Pvu10g1710 466 SMART tpr_5 302 335 IPR019734 GO:0005515
Pvu10g1710 466 SMART tpr_5 268 301 IPR019734 GO:0005515
Pvu10g1710 466 SMART tpr_5 423 456 IPR019734 GO:0005515
Pvu10g1710 466 MobiDBLite consensus disorder prediction 98 149 - -
Pvu10g1710 466 ProSiteProfiles TPR repeat profile. 389 422 IPR019734 GO:0005515
Pvu10g1710 466 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 82 466 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1710 - - pvu:PHAVU_010G164800g 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1710 10 43113084 43120749 Pvu10g1710 10 43113084 43120749 ECH