Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1707 ATGTCCTCCTCCAACACTAACTCTCACTCCAAACCTCAACCTCAGGAAGCTAACATGGCATTGCAAACCCATTCTCCTTCACACTCCCACAACAACATCAACAACAACAAAGGGGTCTTTGGAGATGTCTACACCATCATCAAAGACATGCACGCCGATCATCACAACGCCACCTTTGATTTTCGCCTTCCCCCGCTTCCAAATTTTCTGGGCTCTCGAGAGGCCCGCGAGTTTTTCAGCGGTGCCCTTGCAGGGGCAATGACAAAGGCTATACTTGCTCCTCTTGAGACCATCAGGACAAGAATGGTTGTTGGTGTTGGATCGAGAAATATTGCTGGTAGTTTCGTAGAGGTTGTAGAGCAGCAGGGATGGCAAGGATTGTGGGCTGGAAACATGATTAATATGCTTCGTATAGTTCCAACACAGGCCATTGAGCTGGCCACGTTTGAGTGCGTCAAACGGGCTATGACATCCGTGCAAAGCAAATGGGAGAACACTGACTACCCCAAGTTGCAGATAGGTTGCATCAATTTCAACCTGCCCTTACATTGGATTTCACCAGTTGCTGTTGCTGGTGCCGCAGCAGGGATTGCTAGCACAGTTGTATGCCATCCCCTCGAAGTTTTGAAGGACCGGTTAACTGTTAGTCCTGAAATCTACCCTACTTTAGGTGTCGCGATTAGAAATATTTATAAAGATGGCGGCGTTGGCGCTTTTTATGCTGGTATCTCACCAACACTGGTTGGCATGCTTCCATACAGTACATGTTATTATTTCTTGTATGATACAATGAAGGATTCTTACTGCCGGAGCAAAAAGAAGAAATCTCTAAATCGTCCAGAGATGCTTTTGCTTGGAGCTCTAGCAGGTTTTACTGCCAGTACAATTAGCTTCCCATTGGAGGTGGCTAGGAAGCGGCTGATGGTGGGGGCTTTGCAAGGTAAGTGCCCACCAAACATGGGAGCAGCACTCAGGGAAGTAATTAGAGAAGAAGGTCTGAAGGGTCTCTACAGAGGATGGGGTGCCAGTTGTTTAAAGGTCATGCCATCCTCTGGTATCACCTGGATGTTTTATGAAGCGTGGAAAGACATATTGCTTGTCCAGAATGGTAACCCATTTTAG 1122 0.4706 MSSSNTNSHSKPQPQEANMALQTHSPSHSHNNINNNKGVFGDVYTIIKDMHADHHNATFDFRLPPLPNFLGSREAREFFSGALAGAMTKAILAPLETIRTRMVVGVGSRNIAGSFVEVVEQQGWQGLWAGNMINMLRIVPTQAIELATFECVKRAMTSVQSKWENTDYPKLQIGCINFNLPLHWISPVAVAGAAAGIASTVVCHPLEVLKDRLTVSPEIYPTLGVAIRNIYKDGGVGAFYAGISPTLVGMLPYSTCYYFLYDTMKDSYCRSKKKKSLNRPEMLLLGALAGFTASTISFPLEVARKRLMVGALQGKCPPNMGAALREVIREEGLKGLYRGWGASCLKVMPSSGITWMFYEAWKDILLVQNGNPF* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1707 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 183 267 IPR018108 -
Pvu10g1707 373 MobiDBLite consensus disorder prediction 1 35 - -
Pvu10g1707 373 PANTHER SOLUTE CARRIER FAMILY 25 39 369 - -
Pvu10g1707 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 72 155 IPR018108 -
Pvu10g1707 373 PRINTS Mitochondrial carrier protein signature 77 90 IPR002067 GO:0055085
Pvu10g1707 373 PRINTS Mitochondrial carrier protein signature 90 104 IPR002067 GO:0055085
Pvu10g1707 373 PRINTS Mitochondrial carrier protein signature 130 150 IPR002067 GO:0055085
Pvu10g1707 373 PRINTS Mitochondrial carrier protein signature 240 258 IPR002067 GO:0055085
Pvu10g1707 373 PRINTS Mitochondrial carrier protein signature 286 308 IPR002067 GO:0055085
Pvu10g1707 373 ProSiteProfiles Solute carrier (Solcar) repeat profile. 277 364 IPR018108 -
Pvu10g1707 373 Gene3D Mitochondrial carrier domain 72 369 IPR023395 -
Pvu10g1707 373 SUPERFAMILY Mitochondrial carrier 76 359 IPR023395 -
Pvu10g1707 373 Pfam Mitochondrial carrier protein 281 366 IPR018108 -
Pvu10g1707 373 Pfam Mitochondrial carrier protein 189 269 IPR018108 -
Pvu10g1707 373 Pfam Mitochondrial carrier protein 75 157 IPR018108 -
Pvu10g1707 373 PANTHER MITOCHONDRIAL ADENINE NUCLEOTIDE TRANSPORTER BTL1-RELATED 39 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1707 Pvu-Chr10 43104570 43107574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu10g1707 60 373 Organic Solute Cotransporters AT3G20240 74.204 2.43e-176 492
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1707 - - gmx:100777341 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu10g1707 10 43104570 43107574 Pvu10g1707 10 43104570 43107574 ECH