Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu10g1705 | ATGGAGTTTTTGAAAATCAGGAAGTTCAGAAAATCTCCGAAAGCAGATGGAGAAAAGAATTTGTCTGGCAAGGCGGTGGCTGAGCCCGAGGAACCAAAGCTCAACACTGACGGTCCTGATCAGTGTAAATCAGGAAATGCAGATTCTGCTGGTGAAGCCGAGGATGACGATGATTTTATCACCAATGAGGTTAAGAGGAGGTTGAAAGAATTGAGAAGAAACAGTTTTATGGTGTTGATTCCTGAAGAAGATTCCTGCCCGGAGGAAGGGGAGGATGAAGAGGAAGAGGGAGAGACAAGCTCAAACGAATGGAGGGATGTGGAGGCAGAAGGTCAGCAATGGTGGCGTGGTTTTGACGCTGTGTTTGAAAAATACTGTGAAAGAATGCTATTATTTGATCGGATGAGCACTCAACAGCTTAGAGAAGTTGGCAAAGGTTCACAGTGTACTTCAACTTCAAATCGATCTCCAAGATCTGCATCAAAAAAGCTGGCTTCTCCCCTTCGGTGTCTTTCCTTAAAAAAATTTGAAGAACCTGATAATGAGACTGAACATCTTCAACAGCCAGAGAATGATCCGTACCAGGATATTGAAACAGCATATGTAGGTCAAATTTGCTTGACTTGGGAGGCACTTCATTGTCAGTATTCTCATATGAGTCAGAAGATATCCTGGCAACATGATAATCCTACCTGTTACAACCATAGTGCACAAGAGTTTCAACAGTTCCAGGTTCTATTACAAAGGTTTATGGAAAATGAACCTTTTGAGCATGGCCGTAGAGCTGAAATATATGCTCGCACTAGGAACAATTTGCCTAAACTGCTTCAGGTTCCTAATATACGAGGCTCAGATCATGAATTGACTGATGATGCAGAGATAAGAGTTCTTGCTCCTGAACTGATCAGGATAATTGAAAGCTCTATCCTAACATTCCACCTTTTCCTGAAAAGGGAGAATAAAAAGTCTAGTGGTGCCACCAACCTGTTTGGAAATCAGAACCAGCTTGCAACTCCTCTACACCAGATTCAGTCAACTCTTGAAAAGAAAGTGGTGAAGCTGAAGGAACTGAGGAGAAAGAAAAAAGGTTGGAAGAAGAACTCTTGGCCACAAAAGCATGAGGACATTCAGCTCTTGCTTGGGCTTGTTGACGTGAAGATGGTATCAAGGGTTCTGAGAATGACGAGGATGACCAGGGAGCAACTGTTTTGGTGTGAAGAAAAGATGAAAAAACTGGATTTATCAAGTGGTAGGTTAGAGAGGGATCCATGCCCCATCCTGTTCCCTTGCTAG | 1293 | 0.4292 | MEFLKIRKFRKSPKADGEKNLSGKAVAEPEEPKLNTDGPDQCKSGNADSAGEAEDDDDFITNEVKRRLKELRRNSFMVLIPEEDSCPEEGEDEEEEGETSSNEWRDVEAEGQQWWRGFDAVFEKYCERMLLFDRMSTQQLREVGKGSQCTSTSNRSPRSASKKLASPLRCLSLKKFEEPDNETEHLQQPENDPYQDIETAYVGQICLTWEALHCQYSHMSQKISWQHDNPTCYNHSAQEFQQFQVLLQRFMENEPFEHGRRAEIYARTRNNLPKLLQVPNIRGSDHELTDDAEIRVLAPELIRIIESSILTFHLFLKRENKKSSGATNLFGNQNQLATPLHQIQSTLEKKVVKLKELRRKKKGWKKNSWPQKHEDIQLLLGLVDVKMVSRVLRMTRMTREQLFWCEEKMKKLDLSSGRLERDPCPILFPC* | 431 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu10g1705 | 430 | Coils | Coil | 340 | 367 | - | - | |
| Pvu10g1705 | 430 | PANTHER | DUF1666 FAMILY PROTEIN (DUF1666) | 1 | 430 | - | - | |
| Pvu10g1705 | 430 | MobiDBLite | consensus disorder prediction | 84 | 101 | - | - | |
| Pvu10g1705 | 430 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
| Pvu10g1705 | 430 | MobiDBLite | consensus disorder prediction | 142 | 161 | - | - | |
| Pvu10g1705 | 430 | PANTHER | DNA LIGASE (DUF1666)-RELATED | 1 | 430 | - | - | |
| Pvu10g1705 | 430 | MobiDBLite | consensus disorder prediction | 79 | 107 | - | - | |
| Pvu10g1705 | 430 | MobiDBLite | consensus disorder prediction | 142 | 165 | - | - | |
| Pvu10g1705 | 430 | MobiDBLite | consensus disorder prediction | 1 | 61 | - | - | |
| Pvu10g1705 | 430 | Pfam | Protein of unknown function (DUF1666) | 195 | 429 | IPR012870 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu10g1705 | Pvu-Chr10 | 43098335 | 43102163 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu10g1705 | - | - | gmx:100776804 | 717.227 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pvu10g1705 | 10 | 43098335 | 43102163 | Pvu10g1705 | 10 | 43098335 | 43102163 | ECH |