Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1678 ATGGTCGTGGTTATGAGTGTTGGTCTCCACTTCAGTAGCTGGAGAGCTTGGGAGAAACCCATTTGCAGCGCCCCTTTCTCGAGGGTCTTGCCTGGGTTTGCTGCTACTAAACCATTTCGCATCCCTAGCACAAGAGGATTGTCATATTCTGGAACTACAATTATCCCTCGAGCGGCACCTGTTACTGATGTGGAGGATGGAAATCAAGGCGAGACTGACACCATTCCAACTCCCATAGTTATAATTGACCAAGACTCTGATCCTGATGCAACCATGGTGGAGATAACTTTTGGTGATCGGCTTGGGGCACTTCTTGACACAATGAATGCATTAAAAAACTTAGGTCTCAATGTTGTTAAGGCAAATGTCTTTCTGGATTCATCTGGCAAGCACAACAAGTTTTCCATCACAAAAGCTGATACTGGCAGAAAAGTGGAAGATCCAGAGTTGTTAGAGGCAATTCGTTTGACAATTATAAATAATCTTATTCAATATCATCCGGAGTCAAGTTACCGGTTAGCATTGGGAGCAGCTTTTGGACTTTTGCCTCCAAAAGAGCAG 561 0.4421 MVVVMSVGLHFSSWRAWEKPICSAPFSRVLPGFAATKPFRIPSTRGLSYSGTTIIPRAAPVTDVEDGNQGETDTIPTPIVIIDQDSDPDATMVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDPELLEAIRLTIINNLIQYHPESSYRLALGAAFGLLPPKEQ 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1678 187 PANTHER FROM 2D-PAGE OF LEAF PROTEIN, PUTATIVE-RELATED 37 187 - -
Pvu10g1678 187 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 37 187 IPR040217 -
Pvu10g1678 187 ProSiteProfiles ACT domain profile. 92 172 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1678 Pvu-Chr10 42954991 42957706 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1678 - - pvu:PHAVU_010G1616000 359.377