Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu10g1673 ATGTCGGGCCCACCCAGAGTCCGATCCATGAACGTCGCGGTCGCCGACCCCGACGCGCGTCCGGTGCTCGTTCCGGCAGGCAACAAGGTCCGAGCCGCCGTCGACGTACGCAAGCCGGTGAAGAAATCGACGCCGGAAGCAGAGAAGAAGCCGGTGGCGCATTCAAATGCGCCACCGCAATGCATCTCCGTTCCTCCGCCGTTTATTTTGCGGCGGCAGGAGCGTCACCAGGCCGTGCTGAAAAATCTGTCTTCGATGAACGCTTCGTACTCCTCCGACGCGTCGTCGACGGATTCCTCCACTCATAGTAGCGGCGCGTCGTCAAGTGGGAAGGTGGCTCGTCGGGTTAGTGTGCAGTTGAGGAAGAAGCAGTGTGGTCCCAAGACGGATAAGGTGAGTATTGACAATGTGGGTGGTTCTGATGATGCCGATTTGAGTGATAGCTTGGAGGGCAAGAAACGGTGTGCTTGGGTTACACCAAATACAGAGCCATGCTATGCTGCTTTTCATGACAACGAGTGGGGAGTTCCTGTTCATGACGACAGGAAACTGTTTGAGGTGCTCAGCTTCTCTGGAGCCTTGGCTGAGCTTACATGGCCTACTATTCTTAACAAAAGGCAGCTATTTCGGGAAGTCTTTTTGGATTTTGATCCTAGTGCTGTTTCTAGAATGAATGAGAAAAAAATAGCTGCACCAGGAAGTCCTGCAAACTCATTGCTATCAGAACTCAGGTTGCGATCAATAATTGAAAATGCACGTCAGATGTGTAAGGTAATTGAAGAGTTTGGATCTTTCAATACATTTATTTGGAACTTTGTTAACCACAAGCCTATAGTCAACCAGTTCAGGTACCCACGCCAAGTACCTGTGAAATCTCCAAAAGCTGAAGTCATAAGTAAAGACCTTATAAGGAGAGGTTTCAGGAGTGTTGGACCAACAGTAATCTATACTTTCATGCAAGTTGCTGGCCTAACAAATGACCACCTTATGAGTTGCTTCAGATTCAAGGAGTGTGCCTCCAATGCAGAAGCAATGGCCAACGAAAGCTCCCTCAACTCTAAGGTCAAAGAGAAGGCAAACGAGGAGCCAACTGAGGTGGGTCTGTTGCTGGCTGTGAACAAAATGAATTTCACCTCTAAGTAG 1143 0.4952 MSGPPRVRSMNVAVADPDARPVLVPAGNKVRAAVDVRKPVKKSTPEAEKKPVAHSNAPPQCISVPPPFILRRQERHQAVLKNLSSMNASYSSDASSTDSSTHSSGASSSGKVARRVSVQLRKKQCGPKTDKVSIDNVGGSDDADLSDSLEGKKRCAWVTPNTEPCYAAFHDNEWGVPVHDDRKLFEVLSFSGALAELTWPTILNKRQLFREVFLDFDPSAVSRMNEKKIAAPGSPANSLLSELRLRSIIENARQMCKVIEEFGSFNTFIWNFVNHKPIVNQFRYPRQVPVKSPKAEVISKDLIRRGFRSVGPTVIYTFMQVAGLTNDHLMSCFRFKECASNAEAMANESSLNSKVKEKANEEPTEVGLLLAVNKMNFTSK* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu10g1673 380 MobiDBLite consensus disorder prediction 34 49 - -
Pvu10g1673 380 MobiDBLite consensus disorder prediction 88 114 - -
Pvu10g1673 380 Gene3D Hypothetical protein; domain 2 152 335 - -
Pvu10g1673 380 PANTHER OS04G0501200 PROTEIN 1 379 - -
Pvu10g1673 380 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 379 - -
Pvu10g1673 380 Pfam Methyladenine glycosylase 161 334 IPR005019 GO:0006284|GO:0008725
Pvu10g1673 380 SUPERFAMILY DNA-glycosylase 153 338 IPR011257 GO:0003824|GO:0006281
Pvu10g1673 380 MobiDBLite consensus disorder prediction 34 64 - -
Pvu10g1673 380 MobiDBLite consensus disorder prediction 88 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu10g1673 Pvu-Chr10 42929857 42935148 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu10g1673 K01246 - gmx:100805836 613.224